Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL161636.2-201ENST00000445179 927 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 SNORD127-201ENST00000458892 86 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RPL9P32-201ENST00000464118 620 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 MTCO3P44-201ENST00000510977 541 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP434-201ENST00000516647 121 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.715-201ENST00000517082 110 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 RNA5SP340-201ENST00000517132 107 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC025423.5-201ENST00000550230 219 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 HMGB3P26-201ENST00000560051 582 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 IGHV3-29-201ENST00000604817 344 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AL158032.1-201ENST00000605401 106 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC110801.1-201ENST00000623590 212 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC133552.1-201ENST00000569988 4007 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 AC005725.1-201ENST00000577346 2607 ntBASIC5.94□□□□□ -1.46
PCDHB11Q9Y5F2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL731566.1-201ENST00000620490 1937 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 IQCB2P-201ENST00000401788 1633 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 SNORD14.1-201ENST00000365609 90 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-842P-201ENST00000384269 107 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RPL35AP31-201ENST00000418340 337 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RPS12P5-201ENST00000423449 371 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RPL12P12-201ENST00000424633 501 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 MTND6P12-201ENST00000428247 522 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL645568.3-201ENST00000433683 316 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC073410.1-201ENST00000435125 589 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RPL23AP33-201ENST00000442301 452 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC007967.1-201ENST00000455422 1159 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC084198.1-201ENST00000477747 402 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC092865.4-201ENST00000477936 615 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC006499.3-201ENST00000506077 748 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 IGHV3-76-201ENST00000522465 295 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC091078.2-201ENST00000557145 559 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC020916.2-201ENST00000591242 360 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC025857.2-201ENST00000602711 238 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC141002.1-201ENST00000607025 279 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL138825.1-201ENST00000618587 192 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC007998.5-201ENST00000622938 237 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 CYP4F35P-202ENST00000636121 390 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC108751.5-201ENST00000492880 1336 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AC024587.1-201ENST00000505925 2157 ntBASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDHB11Q9Y5F2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 Y_RNA.276-201ENST00000364732 109 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 RNU6-701P-201ENST00000384059 107 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 RPS15AP40-201ENST00000419621 391 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC079355.1-201ENST00000421770 223 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 RPL12P34-201ENST00000424532 479 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AC245884.2-201ENST00000426257 404 ntBASIC5.92□□□□□ -1.46
PCDHB11Q9Y5F2 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms