Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 PTGES3P1-201ENST00000439531 483 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 TXNP1-201ENST00000441872 371 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC008264.1-201ENST00000447612 367 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC097262.1-201ENST00000452559 548 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 MRPL42P4-201ENST00000453267 443 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RPS4XP2-201ENST00000458402 793 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RPL9P32-201ENST00000464118 620 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RPL23AP67-201ENST00000465341 474 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RPL23AP14-201ENST00000468281 468 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AP001086.1-201ENST00000494882 321 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 FCF1P3-201ENST00000496394 590 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC110794.1-201ENST00000505816 425 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC026427.2-201ENST00000506228 536 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 RNU6-885P-201ENST00000516607 104 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 NDUFS5P6-201ENST00000529136 295 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC006270.2-201ENST00000578523 652 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 MIR4738-201ENST00000579134 87 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AL606834.2-201ENST00000602954 668 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 IGHV3-29-201ENST00000604817 344 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC073657.2-201ENST00000605661 303 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 AC091953.5-201ENST00000622919 233 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 CR383658.2-201ENST00000547576 1525 ntBASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC2.98□□□□□ -1.93
CLCF1Q9UBD9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 HMGB1P5-201ENST00000255320 642 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 SNORA38.1-201ENST00000364172 131 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 MT-TC-201ENST00000387405 66 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AL136116.1-201ENST00000403591 381 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 HMGN1P24-201ENST00000412282 298 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 RPS7P9-201ENST00000414704 586 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 USP9YP21-201ENST00000420603 432 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 USP9YP31-201ENST00000431405 881 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC091862.1-201ENST00000438016 1100 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ATP5C1P1-201ENST00000441945 895 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 Z75741.1-201ENST00000446793 314 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 NPM1P13-201ENST00000452663 865 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC021678.1-201ENST00000505195 936 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 SUMO2P5-201ENST00000506790 245 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC023141.12-201ENST00000512399 199 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 RNU6-1028P-201ENST00000517164 93 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 RN7SKP57-201ENST00000517248 293 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 IGKV2D-36-201ENST00000518643 226 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 MTCO3P15-201ENST00000526563 574 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC019227.1-201ENST00000526902 510 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC037471.2-201ENST00000564941 598 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 MIR5680-201ENST00000577577 84 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC010928.3-201ENST00000587712 541 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC113368.1-201ENST00000603736 382 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 HMGN2P28-201ENST00000606102 262 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AL583856.2-201ENST00000606298 543 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC093673.2-201ENST00000609674 331 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 AC087821.2-201ENST00000637086 450 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ZNF826P-207ENST00000622273 1910 ntBASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.97□□□□□ -1.93
CLCF1Q9UBD9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms