Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 MED14P1-201ENST00000430517 648 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 RPS27AP8-201ENST00000452665 445 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL645939.1-201ENST00000453429 797 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 KATNBL1P6-201ENST00000453433 915 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 HMGB3P30-201ENST00000457863 606 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AF213884.1-201ENST00000488102 463 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AP001025.2-201ENST00000490908 477 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL592156.1-201ENST00000508758 304 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 KCTD9P2-201ENST00000512203 1013 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AP004247.1-201ENST00000531556 1289 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC126177.3-201ENST00000551839 688 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AF131215.7-201ENST00000602443 707 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL161729.3-201ENST00000603533 673 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC114878.2-201ENST00000604863 1251 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC105129.3-201ENST00000605455 485 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC023043.4-201ENST00000612081 449 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC048344.4-201ENST00000619744 527 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC006927.3-201ENST00000638789 384 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AC097504.1-201ENST00000515103 2415 ntBASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.02□□□□□ -1.77
HCN3Q9P1Z3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AL672167.1-206ENST00000356293 943 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC025750.1-201ENST00000399891 379 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AL356421.1-201ENST00000403255 413 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RPL23AP48-201ENST00000406913 488 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RNU2-47P-201ENST00000410649 186 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MTCO1P17-201ENST00000411522 491 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC109780.2-201ENST00000413467 845 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RPL36AP36-201ENST00000418616 301 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 UBTFL3-201ENST00000418934 1024 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AL390023.1-201ENST00000428836 262 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 COX6B1P7-201ENST00000430845 235 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 ABCF2P2-201ENST00000450549 296 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RPL23AP81-201ENST00000455252 467 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 snoU109.4-201ENST00000458953 143 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC010468.1-201ENST00000461022 817 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 HMGB1P25-201ENST00000468402 607 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 UBTFL6-201ENST00000477929 1024 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC104164.2-201ENST00000496953 495 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 OR2A20P-203ENST00000498397 1268 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 TXNP6-201ENST00000510190 310 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC106038.2-201ENST00000520706 568 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AP003730.1-201ENST00000524605 285 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC068587.4-201ENST00000533893 186 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 GTF2IP22-201ENST00000554443 182 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 PCMTD1P2-201ENST00000565017 355 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC004853.1-201ENST00000604902 698 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC128687.1-201ENST00000605304 619 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 FAM27D1-201ENST00000612308 341 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AL596245.1-201ENST00000618994 362 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC019278.1-201ENST00000623516 479 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC073530.2-201ENST00000623987 261 ntBASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HCN3Q9P1Z3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms