Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 U8.11-201ENST00000384699 133 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 U8.12-201ENST00000384701 133 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 RPL7P60-201ENST00000397636 735 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL031679.1-201ENST00000400616 525 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 HSPE1P8-201ENST00000406997 288 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL592310.1-201ENST00000414330 671 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 DUTP6-201ENST00000425573 462 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 NDUFB1P1-201ENST00000435191 180 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC005297.2-201ENST00000450430 606 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 U8.18-201ENST00000459285 133 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 RPS4XP10-201ENST00000465034 731 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 MLLT10P2-201ENST00000506434 249 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC021146.1-201ENST00000511202 716 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC010587.2-201ENST00000511727 448 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 NPM1P41-201ENST00000512920 831 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC090615.1-201ENST00000577519 154 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 VN1R78P-201ENST00000597393 564 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL450336.1-201ENST00000605180 586 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL365503.1-201ENST00000605247 905 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC007349.4-201ENST00000608114 532 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC024941.1-201ENST00000612250 334 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL357080.1-201ENST00000617394 239 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL359715.5-201ENST00000623431 443 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AL356121.2-201ENST00000624715 780 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 OR4G11P-202ENST00000642116 1414 ntBASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
BLOC1S4Q9NUP1 AF127577.6-201ENST00000623352 2191 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 RNA5SP424-201ENST00000390988 115 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AL356131.1-201ENST00000405826 414 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 MIR1193-201ENST00000408109 78 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 RNA5SP129-201ENST00000410276 118 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 SSR1P2-201ENST00000415208 787 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 COX7BP2-201ENST00000437976 242 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 SDCBPP1-201ENST00000440192 890 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC006480.1-201ENST00000449887 378 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 Z82190.1-201ENST00000454534 490 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 USP9YP10-201ENST00000454868 628 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 BTF3P5-201ENST00000457252 467 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AL133162.1-201ENST00000463228 453 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 SNRPGP3-201ENST00000469405 227 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 RPL7P18-201ENST00000478965 734 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC068587.1-201ENST00000483613 781 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC108729.1-201ENST00000487812 947 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 USP9YP5-201ENST00000511770 630 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 FABP5P12-201ENST00000515543 389 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC008011.1-201ENST00000545989 227 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 MIR5685-201ENST00000579080 79 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AL031176.1-201ENST00000604554 466 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AP000240.1-201ENST00000609910 452 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AC023510.2-201ENST00000622162 746 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
BLOC1S4Q9NUP1 DDX43P2-201ENST00000604753 1354 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms