Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MIR93-201ENST00000385024 80 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 SNORD17-201ENST00000390930 237 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 RSL24D1P4-201ENST00000400938 484 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 RNU6-757P-201ENST00000410334 100 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 LUZP4P1-201ENST00000415420 344 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC092634.6-201ENST00000418558 192 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MTCO3P1-205ENST00000422088 832 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL158156.1-201ENST00000422509 473 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL391219.1-201ENST00000422570 483 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC005300.1-201ENST00000428401 373 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL354941.1-201ENST00000438600 464 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 RPS26P56-201ENST00000444468 240 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 U3.44-201ENST00000458938 192 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC110792.2-201ENST00000510278 224 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC010486.3-201ENST00000511602 785 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AP003117.2-201ENST00000606010 545 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AL603755.1-201ENST00000619504 163 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MIR3651-201ENST00000630427 90 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC116618.1-201ENST00000634617 774 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 SGO1P2-201ENST00000429458 1589 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 RNU6-251P-201ENST00000363235 104 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 RNA5SP167-201ENST00000365461 116 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MIR506-201ENST00000384998 124 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MIR483-201ENST00000385070 76 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AL136133.1-201ENST00000413694 376 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC009237.2-201ENST00000421358 284 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 RPP40P1-201ENST00000426762 456 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 RPL31P54-201ENST00000429803 370 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC010655.1-201ENST00000449336 292 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AL133217.1-201ENST00000450980 425 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 SNORA48.10-201ENST00000516965 160 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MTCO1P47-201ENST00000523889 1271 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AL121766.1-201ENST00000547436 487 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 ELOCP32-201ENST00000548625 324 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 HIGD1AP17-201ENST00000554576 276 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC109446.2-201ENST00000567872 497 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC138915.2-201ENST00000569776 97 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MIR5195-201ENST00000583555 115 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.25□□□□□ -1.73
DDX4Q9NQI0 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AL732618.1-201ENST00000623251 301 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC091905.1-201ENST00000624400 311 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 AC103706.2-201ENST00000638080 240 ntBASIC4.25□□□□□ -1.73
DDX4Q9NQI0 MTND5P31-201ENST00000419366 1374 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms