Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC039056.2-201ENST00000622261 511 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL513302.2-201ENST00000562313 1842 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RNU6-1200P-201ENST00000384162 107 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 MTCO3P31-201ENST00000405526 789 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 NCSTNP1-201ENST00000406229 144 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RNU6-55P-201ENST00000411092 107 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RNU6-954P-201ENST00000411355 107 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RPP40P1-201ENST00000426762 456 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 MTND4P32-201ENST00000437189 1237 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 KATNBL1P3-201ENST00000443475 909 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC239809.1-201ENST00000450470 217 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 SNORD105B-201ENST00000458770 79 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 BZW1P2-201ENST00000473537 826 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RPS3AP43-201ENST00000479743 781 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC147055.4-201ENST00000504399 745 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 HMGN1P11-201ENST00000508668 303 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 MTCO1P30-201ENST00000515244 580 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RNU6-759P-201ENST00000516740 103 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 SNORA48.10-201ENST00000516965 160 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 RN7SKP60-201ENST00000516985 239 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC027309.2-201ENST00000520566 192 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 TOMM20P2-201ENST00000540082 421 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC006116.10-201ENST00000591836 581 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC006539.2-201ENST00000601729 572 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AL358072.1-201ENST00000604156 575 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC025125.1-201ENST00000624743 1922 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 AC032011.1-201ENST00000611703 1549 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 MTND4P34-201ENST00000572715 1371 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 USP8P1-201ENST00000494673 3183 ntBASIC3.73□□□□□ -1.81
SIX2Q9NPC8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SIX2Q9NPC8 PHKBP1-201ENST00000450951 1951 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RNU6-251P-201ENST00000363235 104 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RNU6-444P-201ENST00000383988 108 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AL121978.1-201ENST00000402778 359 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC008280.1-201ENST00000418851 412 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 MTCO3P1-205ENST00000422088 832 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 NIPA2P1-201ENST00000426223 976 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RPL31P54-201ENST00000429803 370 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 YWHAZP8-201ENST00000436935 731 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC241584.1-201ENST00000438469 1241 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AL591503.2-201ENST00000442314 1005 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 HSPE1P23-201ENST00000509838 286 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 OR5BM1P-201ENST00000512021 366 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 MTCO3P28-201ENST00000513351 515 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RN7SKP18-201ENST00000516005 275 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 SNORA70.19-201ENST00000516717 90 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 RNU6-1261P-201ENST00000517194 104 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC107918.3-201ENST00000533272 382 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC135279.1-201ENST00000543493 504 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 EIF5A2P1-201ENST00000564027 460 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.72□□□□□ -1.81
SIX2Q9NPC8 NF1P5-201ENST00000588287 448 ntBASIC3.72□□□□□ -1.81
SIX2Q9NPC8 AC040904.1-201ENST00000590850 223 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms