Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SNORD62.1-201ENST00000362541 86 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 RPL7P36-201ENST00000444633 681 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC092754.2-201ENST00000463506 460 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 RPL7P20-201ENST00000520308 745 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 SERPINE4P-201ENST00000554978 281 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC009163.5-201ENST00000575421 637 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 DNAJC19P3-201ENST00000594491 331 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AL590808.1-201ENST00000618696 141 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC002546.1-201ENST00000588041 2504 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 GTF2H2B-203ENST00000508065 1432 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 SNORA26.7-201ENST00000391288 122 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AL590004.2-201ENST00000404787 371 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 MTND4P11-201ENST00000417020 1058 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 RPL30P3-201ENST00000424262 333 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AP002884.2-201ENST00000471647 395 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 RPL23AP44-201ENST00000482216 473 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AL391156.1-201ENST00000554965 554 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 MIR4506-201ENST00000584693 77 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 TPMTP1-201ENST00000592307 737 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 LLPHP1-201ENST00000603571 367 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC010149.2-201ENST00000637608 315 ntBASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KIAA1549Q9HCM3 AC006378.2-201ENST00000623178 2476 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 MIR592-201ENST00000384959 97 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 RPLP0P7-201ENST00000416050 667 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AL592437.1-201ENST00000443781 492 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 PTGES3P5-201ENST00000455109 434 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AC128713.1-201ENST00000471495 306 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 RN7SKP82-201ENST00000516786 223 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AP000857.1-201ENST00000532151 543 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AC026790.2-201ENST00000606282 430 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 MTND5P7-201ENST00000413558 1798 ntBASIC2.35□□□□□ -2.03
KIAA1549Q9HCM3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 SNORA51.4-201ENST00000364993 124 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 SNORD65-201ENST00000391079 73 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 RNA5SP129-201ENST00000410276 118 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 RNU2-37P-201ENST00000410695 177 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 Z93242.1-201ENST00000427102 353 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AL138799.3-201ENST00000438968 350 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AL590399.6-201ENST00000446396 307 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC034244.2-201ENST00000514668 858 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC006065.5-201ENST00000623427 349 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 AC092159.4-201ENST00000624944 550 ntBASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
KIAA1549Q9HCM3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 SNORD114-30-201ENST00000364448 72 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AL360182.1-201ENST00000397433 468 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 FAT1P1-201ENST00000406588 507 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AC009961.3-201ENST00000449832 765 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 TPMTP4-201ENST00000450749 678 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AP003122.3-201ENST00000526316 255 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AC091544.4-201ENST00000555268 342 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 ZNF192P1-203ENST00000565888 810 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 MIR548Y-201ENST00000582739 110 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AC078899.3-201ENST00000599065 212 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms