Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 RNU6-941P-201ENST00000516346 108 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 HMGB1P40-201ENST00000525121 540 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 LSM6P2-201ENST00000552208 177 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC020661.2-201ENST00000560114 134 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC012182.1-201ENST00000570133 895 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC010591.1-201ENST00000603941 649 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AL355472.4-201ENST00000610233 626 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 MIR6748-201ENST00000610433 71 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 AC006020.1-201ENST00000420179 1854 ntBASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
FOXP3Q9BZS1 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 NACAP2-201ENST00000318548 624 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL161781.1-201ENST00000354277 403 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 MIR550A3-201ENST00000390735 95 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 SNORA68.2-201ENST00000391263 128 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC013442.1-201ENST00000397347 228 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL078599.1-201ENST00000402075 293 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP216-201ENST00000411050 312 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC104651.2-201ENST00000447549 528 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL356981.1-201ENST00000454879 684 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC091685.2-201ENST00000454924 864 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL356010.1-201ENST00000456364 102 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.632-201ENST00000459189 102 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC091180.1-201ENST00000462104 372 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AP000893.1-201ENST00000474462 794 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 TXNP6-201ENST00000510190 310 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC018797.3-201ENST00000513388 1241 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 ENPP7P9-201ENST00000514456 627 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP13-201ENST00000515933 244 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.691-201ENST00000516611 103 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC012400.1-201ENST00000518452 381 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 SUB1P1-201ENST00000524415 382 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 PSMA2P1-201ENST00000526365 646 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 OR4R1P-201ENST00000529879 463 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 OR4T1P-201ENST00000554933 911 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC005668.1-201ENST00000571142 476 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 KC877982.1-201ENST00000602313 470 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC021646.1-201ENST00000605469 484 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL355816.1-201ENST00000607951 118 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC092747.4-201ENST00000620519 1861 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC105074.1-201ENST00000623380 3095 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 CYP4F35P-202ENST00000636121 390 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 MTND4P35-201ENST00000604257 1375 ntBASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
FOXP3Q9BZS1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.184-201ENST00000363884 108 ntBASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 Y_RNA.255-201ENST00000364581 97 ntBASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 RNU6-738P-201ENST00000384531 106 ntBASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 MIR105-1-201ENST00000385222 81 ntBASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
FOXP3Q9BZS1 AL356967.1-201ENST00000406305 431 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms