Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC005725.1-201ENST00000577346 2607 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SALL1P1-201ENST00000438101 3837 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 OR51A10P-201ENST00000307165 937 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU5A-1-201ENST00000362698 116 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-527P-201ENST00000363425 104 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-414P-201ENST00000363705 104 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNA5SP172-201ENST00000365061 118 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA70.3-201ENST00000365075 132 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU1-84P-201ENST00000365447 164 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-484P-201ENST00000384016 107 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 MIR759-201ENST00000390224 91 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 Y_RNA.587-201ENST00000391210 103 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC013442.1-201ENST00000397347 228 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC007064.1-201ENST00000412238 351 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 DDX39BP1-205ENST00000422507 192 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPL30P3-201ENST00000424262 333 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNRPBP1-201ENST00000443634 282 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 snoU13.7-201ENST00000459220 104 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC087588.1-201ENST00000462203 316 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC091179.3-201ENST00000474761 144 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC018645.1-201ENST00000505003 109 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC083906.1-201ENST00000509298 406 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-1299P-201ENST00000516316 100 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-344P-201ENST00000516635 111 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNA5SP471-201ENST00000516971 106 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL138895.2-201ENST00000603019 178 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 CR382285.1-202ENST00000604687 547 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORD96A-201ENST00000606577 79 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 PFKM-232ENST00000629846 381 ntTSL 4 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC145138.1-201ENST00000512908 2851 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 MAPK10-347ENST00000641762 2856 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL512662.1-201ENST00000624850 2251 ntBASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SYT2-202ENST00000367268 7598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
KRTAP9-3Q9BYQ3 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 SMG1P6-201ENST00000532337 2930 ntBASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC007938.2-201ENST00000604666 2634 ntBASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
KRTAP9-3Q9BYQ3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms