Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RPL29P29-201ENST00000448725 423 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC005297.2-201ENST00000450430 606 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC092001.1-201ENST00000453012 261 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 RPS20P24-201ENST00000457473 361 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 OR9M1P-201ENST00000459641 921 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 OR5H5P-201ENST00000503164 928 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC005798.1-201ENST00000513715 387 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 HMGN1P9-201ENST00000515212 298 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 RN7SKP13-201ENST00000515933 244 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 DEFB108A-201ENST00000530110 222 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MIR4307-201ENST00000582802 84 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC060780.2-201ENST00000589047 198 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 TPMTP1-201ENST00000592307 737 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 COX6CP4-201ENST00000605798 228 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AL158211.4-201ENST00000606988 584 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC063943.3-201ENST00000615562 356 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC108479.2-201ENST00000617314 601 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 U3.53-201ENST00000628922 216 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 AC099654.5-201ENST00000636479 350 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 MTCO1P24-201ENST00000515438 1558 ntBASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.73□□□□□ -1.65
LRFN3Q9BTN0 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 OR11H4-201ENST00000315409 1082 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 SNORA72.1-201ENST00000363485 129 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 Y_RNA.256-201ENST00000364594 104 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 RNU5E-5P-201ENST00000365379 116 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MIR34B-201ENST00000385076 84 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 SNORD115-47-201ENST00000391226 86 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MTCYBP36-201ENST00000404146 440 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 OR8F1P-201ENST00000425243 930 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 HMGB1P31-201ENST00000437242 427 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC112653.1-201ENST00000443851 386 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MRPL48P1-201ENST00000445390 636 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 PDSS1P2-201ENST00000449397 678 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 ANP32BP3-201ENST00000559213 706 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC105129.1-201ENST00000560250 297 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC106782.4-201ENST00000568264 210 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MIR4528-201ENST00000577763 90 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AL390208.1-201ENST00000605885 644 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC006566.1-201ENST00000608943 513 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 U73479.1-201ENST00000618062 168 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AL139089.1-201ENST00000620372 975 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 TEX21P-201ENST00000447107 1476 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 AC092447.10-201ENST00000620607 1652 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MTND5P26-201ENST00000426018 1752 ntBASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRFN3Q9BTN0 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.65
LRFN3Q9BTN0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
LRFN3Q9BTN0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
LRFN3Q9BTN0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.71□□□□□ -1.65
LRFN3Q9BTN0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RNU4-44P-201ENST00000363050 141 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 Y_RNA.97-201ENST00000363094 102 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RNU6-777P-201ENST00000364265 104 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 SNORA73.2-201ENST00000364946 201 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms