Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC093591.3-201ENST00000634516 308 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 Z82217.1-201ENST00000625157 8149 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 AC093535.2-201ENST00000624769 2326 ntBASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PAAF1Q9BRP4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC092435.4-201ENST00000623012 4159 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MTND4P4-201ENST00000439033 1366 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 OR11H5P-202ENST00000641612 1325 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 SNORA60-201ENST00000362396 134 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 RNU6-878P-201ENST00000384578 110 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 U8.14-201ENST00000390843 143 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MIR1250-201ENST00000408098 113 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 RPL31P2-201ENST00000413849 377 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC012065.2-201ENST00000421295 375 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MTCO2P5-201ENST00000422621 426 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC002381.1-201ENST00000447049 280 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MTCO1P27-201ENST00000448269 226 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 CFTRP1-201ENST00000456646 183 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 RPL31P50-201ENST00000471002 296 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 RPL29P14-201ENST00000495837 428 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC005798.1-201ENST00000513715 387 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC034159.1-201ENST00000513885 583 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 RN7SKP234-201ENST00000517173 224 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 MIR92B-201ENST00000607575 96 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC090425.2-201ENST00000608818 501 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC025594.3-201ENST00000613068 790 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC010678.1-201ENST00000614118 713 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC027807.2-201ENST00000616099 408 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AL359715.5-201ENST00000623431 443 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 AC021242.1-201ENST00000507315 2035 ntBASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PAAF1Q9BRP4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL049555.1-201ENST00000562834 1933 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 RNU6-28P-201ENST00000362378 107 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 RNA5SP124-201ENST00000362739 110 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 OR5H15-201ENST00000383696 930 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC006366.1-201ENST00000422002 759 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 ST13P20-201ENST00000447996 1065 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 RNA5SP269-201ENST00000459032 137 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AP000797.1-201ENST00000478870 387 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 OR6C73P-201ENST00000546432 358 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 MIR544B-201ENST00000582372 78 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 MIR548AB-201ENST00000584917 84 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC012065.4-201ENST00000602445 679 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL451044.1-201ENST00000604867 238 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL451086.1-201ENST00000605596 223 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC087752.4-201ENST00000605911 462 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL357080.1-201ENST00000617394 239 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AC009237.17-201ENST00000618111 748 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 AL354798.1-201ENST00000622505 329 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 FP236240.3-201ENST00000623061 327 ntBASIC4.31□□□□□ -1.72
PAAF1Q9BRP4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms