Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AL049610.1-201ENST00000423374 372 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL158071.1-201ENST00000430315 461 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.28□□□□□ -1.72
MEIS3Q99687 HMGB3P10-201ENST00000434734 572 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 HMGB1P45-201ENST00000435986 653 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 MTCYBP34-201ENST00000439552 670 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL592437.1-201ENST00000443781 492 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL606662.1-201ENST00000445763 553 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MEIS3Q99687 PRDX3P3-201ENST00000447765 522 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 CALM1P2-201ENST00000452941 448 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.28□□□□□ -1.72
MEIS3Q99687 RNU6-599P-201ENST00000459383 107 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 RNU6-1193P-201ENST00000459461 107 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.28□□□□□ -1.72
MEIS3Q99687 Y_RNA.695-201ENST00000516715 107 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 MIR2276-201ENST00000516886 89 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 FAM106CP-201ENST00000582212 507 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.28□□□□□ -1.72
MEIS3Q99687 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MEIS3Q99687 WISP1-OT1-201ENST00000602893 642 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC008739.3-201ENST00000603262 127 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 DUXAP11-201ENST00000603858 526 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AP002360.4-201ENST00000606980 481 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC004223.4-201ENST00000612426 332 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL122125.1-201ENST00000616999 600 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
MEIS3Q99687 MIR6075-201ENST00000620782 95 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 RNU6-368P-201ENST00000620928 107 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 RNU6-538P-201ENST00000622329 107 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AL356121.2-201ENST00000624715 780 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 AC087359.1-201ENST00000508335 1740 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MEIS3Q99687 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
MEIS3Q99687 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
MEIS3Q99687 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 MTCO1P12-201ENST00000414273 1543 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AP000776.1-201ENST00000530032 1663 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 RNU1-33P-201ENST00000364249 162 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 RNU6-1215P-201ENST00000384441 102 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 Y_RNA.517-201ENST00000384551 106 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 RNU6-920P-201ENST00000410926 92 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 MTCO2P34-201ENST00000421994 607 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 MTND4LP11-201ENST00000422184 280 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AP000907.1-201ENST00000428428 510 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC097713.2-201ENST00000430199 356 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 ATP5F1P1-201ENST00000433775 569 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 YWHAZP7-201ENST00000436906 631 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 MTND2P20-201ENST00000440805 661 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC023512.1-201ENST00000444513 499 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 CDC42P1-201ENST00000456658 548 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 RPL21P13-201ENST00000488305 481 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AL024509.2-201ENST00000493462 493 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.27□□□□□ -1.73
MEIS3Q99687 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AP000859.1-201ENST00000525536 307 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MEIS3Q99687 AL358913.1-201ENST00000554342 121 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 VN1R88P-201ENST00000596787 292 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.27□□□□□ -1.73
MEIS3Q99687 U73023.1-201ENST00000603134 700 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.27□□□□□ -1.73
MEIS3Q99687 AL355365.1-201ENST00000616480 294 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 FRG1HP-204ENST00000617940 757 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AC092192.1-201ENST00000633154 1018 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.27□□□□□ -1.73
MEIS3Q99687 RLIMP2-201ENST00000427891 1563 ntBASIC4.27□□□□□ -1.73
MEIS3Q99687 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MEIS3Q99687 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.26□□□□□ -1.73
MEIS3Q99687 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MEIS3Q99687 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
MEIS3Q99687 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MEIS3Q99687 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms