Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 CEP170P1-201ENST00000502249 4587 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.74□□□□□ -1.81
CDCA3Q99618 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.74□□□□□ -1.81
CDCA3Q99618 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.74□□□□□ -1.81
CDCA3Q99618 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.74□□□□□ -1.81
CDCA3Q99618 SNORA70.14-201ENST00000516205 110 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 RN7SKP277-201ENST00000516895 283 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 SNORA48.10-201ENST00000516965 160 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 RN7SKP289-201ENST00000517244 295 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.74□□□□□ -1.81
CDCA3Q99618 AP001189.2-201ENST00000527320 189 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AP000790.1-201ENST00000528891 737 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.74□□□□□ -1.81
CDCA3Q99618 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.74□□□□□ -1.81
CDCA3Q99618 AL158211.1-201ENST00000566763 763 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AC091057.2-201ENST00000602594 792 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 HMGB1P50-201ENST00000605814 607 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AC103858.2-201ENST00000621471 543 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 AP000770.2-201ENST00000623694 100 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 FAM35DP-201ENST00000323387 2712 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CDCA3Q99618 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
CDCA3Q99618 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.73□□□□□ -1.81
CDCA3Q99618 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.73□□□□□ -1.81
CDCA3Q99618 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDCA3Q99618 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDCA3Q99618 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 RNU6-560P-201ENST00000364007 108 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.73□□□□□ -1.81
CDCA3Q99618 SUGT1P1-201ENST00000379514 476 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CDCA3Q99618 Y_RNA.500-201ENST00000384466 111 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 UBA52P6-201ENST00000399822 382 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AL590084.1-201ENST00000407885 387 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC069218.2-201ENST00000411665 344 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC092634.6-201ENST00000418558 192 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 RPL31P54-201ENST00000429803 370 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC236972.1-201ENST00000433225 199 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC241584.1-201ENST00000438469 1241 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.73□□□□□ -1.81
CDCA3Q99618 TPTE2P3-201ENST00000441562 1189 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 Z73417.1-201ENST00000447373 778 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC004022.1-201ENST00000447766 1066 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AL034418.1-201ENST00000448675 860 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 RFC5P1-201ENST00000454419 874 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.73□□□□□ -1.81
CDCA3Q99618 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 MTCYBP16-201ENST00000509187 1129 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 PHBP14-201ENST00000512887 367 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC010342.1-201ENST00000514047 877 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.73□□□□□ -1.81
CDCA3Q99618 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.73□□□□□ -1.81
CDCA3Q99618 MTCYBP27-201ENST00000555160 670 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 TRAV15-201ENST00000556680 249 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC138915.2-201ENST00000569776 97 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC141257.3-201ENST00000572906 215 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 MIR5680-201ENST00000577577 84 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 BNIP3P26-201ENST00000600827 554 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC113368.1-201ENST00000603736 382 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC023158.2-201ENST00000614876 543 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC011330.2-201ENST00000621680 635 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC026634.1-201ENST00000634369 198 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC009452.1-201ENST00000640823 606 ntBASIC3.73□□□□□ -1.81
CDCA3Q99618 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.73□□□□□ -1.81
CDCA3Q99618 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CDCA3Q99618 AC018555.1-201ENST00000567548 1980 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDCA3Q99618 AC109315.1-201ENST00000584143 1347 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDCA3Q99618 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDCA3Q99618 AC117529.2-201ENST00000512159 2068 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDCA3Q99618 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDCA3Q99618 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CDCA3Q99618 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.72□□□□□ -1.81
CDCA3Q99618 Y_RNA.408-201ENST00000383987 102 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 Y_RNA.465-201ENST00000384293 102 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 RNU6-921P-201ENST00000384361 107 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 MIR649-201ENST00000384843 97 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.72□□□□□ -1.81
CDCA3Q99618 AL122016.1-201ENST00000403365 367 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms