Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 Y_RNA.36-201ENST00000362602 112 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 RPS26P30-201ENST00000443431 335 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 AL592437.1-201ENST00000443781 492 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SPG11Q96JI7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 AL136981.2-201ENST00000617319 734 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 AL355493.4-201ENST00000618530 292 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 YWHAEP7-203ENST00000622054 312 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 MTND4P10-201ENST00000446199 1363 ntBASIC2.13□□□□□ -2.07
SPG11Q96JI7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SPG11Q96JI7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 RN7SKP32-201ENST00000410167 303 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 TVP23BP2-201ENST00000455082 615 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 RPL30P9-201ENST00000465586 330 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC026436.1-201ENST00000510537 270 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC011494.1-201ENST00000596454 237 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SPG11Q96JI7 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 Y_RNA.224-201ENST00000364308 111 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 BTG3P1-201ENST00000435859 716 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 LTV1P1-201ENST00000510683 1237 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC245166.1-201ENST00000521012 253 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC008083.2-201ENST00000546707 476 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC110994.2-201ENST00000635481 492 ntBASIC2.12□□□□□ -2.07
SPG11Q96JI7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.12□□□□□ -2.07
SPG11Q96JI7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 RNY1-201ENST00000364228 113 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 BTF3P7-201ENST00000407097 488 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 CYCSP49-201ENST00000420810 319 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AC096638.1-201ENST00000444678 216 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 MTCO3P11-201ENST00000455103 774 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 RPL23AP45-201ENST00000476406 468 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 RAC1P5-201ENST00000512182 576 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 RPL23AP84-201ENST00000571193 464 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AC061975.8-201ENST00000587058 721 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPG11Q96JI7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SPG11Q96JI7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPG11Q96JI7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SPG11Q96JI7 RNU1-75P-201ENST00000347264 129 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 EIF5P1-201ENST00000400019 1231 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 RN7SKP285-201ENST00000410137 318 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 RAC1P3-201ENST00000416129 580 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 ELOCP13-201ENST00000443934 329 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 IGKV2D-23-201ENST00000518179 286 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 AC126177.3-201ENST00000551839 688 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 PSMA3P-201ENST00000555485 635 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AL731537.2-201ENST00000561565 951 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AP005137.2-201ENST00000609238 400 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 AL589994.2-201ENST00000621124 579 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SPG11Q96JI7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
SPG11Q96JI7 AL359893.1-201ENST00000447628 1580 ntBASIC2.11□□□□□ -2.07
SPG11Q96JI7 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPG11Q96JI7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPG11Q96JI7 MTND5P6-201ENST00000422338 1798 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SPG11Q96JI7 Y_RNA.191-201ENST00000363972 113 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 RHEBP3-201ENST00000411920 351 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC021146.5-201ENST00000503544 545 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC015911.5-201ENST00000587076 451 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPG11Q96JI7 RNU6-661P-201ENST00000362409 107 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 MIR1276-201ENST00000408707 83 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC245291.1-201ENST00000419501 328 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 MTND6P18-201ENST00000439477 513 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 RNA5SP281-201ENST00000516504 135 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 OR10D4P-201ENST00000525892 951 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC128657.1-201ENST00000549459 145 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 AC025946.2-201ENST00000603398 234 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms