Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL592293.2-201ENST00000422292 996 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 CBX1P1-201ENST00000440184 427 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 HSPE1P28-201ENST00000443139 211 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 CDC27P1-201ENST00000445384 715 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC239367.2-201ENST00000447309 705 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RPL5P32-201ENST00000454085 879 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RPS29P19-201ENST00000479709 171 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RPL35P6-201ENST00000490024 372 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC104164.2-201ENST00000496953 495 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC005798.1-201ENST00000513715 387 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RNU4-60P-201ENST00000517239 135 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 COX6CP8-201ENST00000522620 226 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 TVP23BP1-201ENST00000557500 617 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MTND6P33-201ENST00000571794 183 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MIR4700-201ENST00000578311 74 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MIR544B-201ENST00000582372 78 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 OR4G1P-201ENST00000588632 938 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC100793.4-201ENST00000613683 429 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AL590240.3-201ENST00000621416 943 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 AC093591.3-201ENST00000634516 308 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 KPNA2P2-201ENST00000419546 1489 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 MTND5P3-201ENST00000438536 1800 ntBASIC4.79□□□□□ -1.64
CDK5RAP3Q96JB5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MTCO1P24-201ENST00000515438 1558 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 Y_RNA.505-201ENST00000384489 102 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RN7SKP266-201ENST00000410232 287 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RPL31P2-201ENST00000413849 377 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 GLRXP1-201ENST00000423261 334 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC002381.1-201ENST00000447049 280 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 SSXP1-201ENST00000453640 473 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 OR6K1P-201ENST00000456766 971 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC079804.1-201ENST00000461922 436 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RN7SL303P-201ENST00000469773 251 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC022034.3-201ENST00000471393 478 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL592156.1-201ENST00000508758 304 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC109458.1-201ENST00000508858 316 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 TMEM248P1-201ENST00000510579 951 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC034159.1-201ENST00000513885 583 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 IGHV3-32-201ENST00000519182 355 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RAB9BP1-201ENST00000519581 626 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 IGLVIV-53-201ENST00000520107 367 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MTCYBP20-201ENST00000524239 1129 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 CBX3P5-201ENST00000552017 521 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL391156.1-201ENST00000554965 554 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC078795.2-201ENST00000602835 1252 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 RPL23AP92-201ENST00000603609 255 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MIR7154-201ENST00000620673 73 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AL445363.3-201ENST00000623080 671 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms