Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AL355816.1-201ENST00000607951 118 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 AC123768.4-201ENST00000616244 701 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.74□□□□□ -1.65
CHFRQ96EP1 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHFRQ96EP1 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.74□□□□□ -1.65
CHFRQ96EP1 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 RPL21P132-201ENST00000331267 462 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 SNORD81.2-201ENST00000365153 76 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHFRQ96EP1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 Y_RNA.409-201ENST00000383990 98 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 RNU6-1122P-201ENST00000384449 107 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 LINC01347-201ENST00000417964 355 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 RPL17P36-201ENST00000420302 549 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 OR2AH1P-201ENST00000425717 928 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 SAR1AP4-201ENST00000429225 591 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC018644.1-201ENST00000429934 551 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 RPL35AP21-201ENST00000437667 333 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC090142.1-201ENST00000465776 462 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 S100A11P1-201ENST00000477525 312 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC090013.1-201ENST00000485147 480 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC011352.3-201ENST00000505162 593 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 PAICSP4-201ENST00000517543 1253 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC105031.1-201ENST00000518550 476 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC087808.1-201ENST00000520501 361 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 MIR4666A-201ENST00000580160 79 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 NF1P5-201ENST00000588287 448 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC020914.6-201ENST00000594327 272 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC090948.1-201ENST00000607464 549 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC114781.5-201ENST00000615297 108 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC015914.2-201ENST00000618167 288 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC024940.5-201ENST00000622889 474 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC079228.1-201ENST00000624774 1049 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC125257.1-201ENST00000560400 2930 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CHFRQ96EP1 AC009951.1-201ENST00000623674 2614 ntBASIC4.73□□□□□ -1.65
CHFRQ96EP1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 SALL4P2-201ENST00000423288 2910 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 RNU6-845P-201ENST00000362578 103 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 Y_RNA.86-201ENST00000363020 111 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 RNU6-433P-201ENST00000363216 104 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL356432.1-201ENST00000405809 419 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 HMGB3P18-201ENST00000406327 590 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 RNU4-55P-201ENST00000410731 137 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 RGS17P1-201ENST00000423358 553 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 RPS12P5-201ENST00000423449 371 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL050321.1-201ENST00000432363 400 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms