Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AL353691.1-201ENST00000451332 387 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 RNU6-150P-201ENST00000516237 95 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 SNORA31.8-201ENST00000516327 108 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC034105.4-201ENST00000568304 277 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 BNIP3P22-201ENST00000593399 556 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC091057.2-201ENST00000602594 792 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 BBIP1P1-201ENST00000602999 279 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AC006386.1-201ENST00000619436 415 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 AL353748.2-201ENST00000622148 471 ntBASIC4.23□□□□□ -1.73
SKA1Q96BD8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SKA1Q96BD8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SKA1Q96BD8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.23□□□□□ -1.73
SKA1Q96BD8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 RNA5SP295-201ENST00000362655 121 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 RNA5SP283-201ENST00000365604 119 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 RN7SKP33-201ENST00000410942 340 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AL953862.1-201ENST00000423016 168 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 MTCO1P39-201ENST00000426148 480 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 HMGB3P5-201ENST00000428894 612 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AL590103.1-201ENST00000434488 307 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC004866.2-201ENST00000438285 481 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AF228730.2-201ENST00000438784 848 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 snoU13.8-201ENST00000458890 104 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 SNORD11.1-201ENST00000459482 85 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 OR9M1P-201ENST00000459641 921 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 PPIAP15-201ENST00000479662 484 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AP002812.1-201ENST00000495378 474 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 SAP18P1-201ENST00000512058 390 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 RN7SKP13-201ENST00000515933 244 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC244505.7-201ENST00000599675 272 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 VN1R82P-201ENST00000601481 356 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC006254.3-201ENST00000603353 884 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC245389.1-201ENST00000605141 529 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 MIR92B-201ENST00000607575 96 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AL392048.1-201ENST00000613946 534 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC007546.1-201ENST00000619452 559 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AP002782.1-201ENST00000623107 614 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 DDX43P2-201ENST00000604753 1354 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 AC002546.1-201ENST00000588041 2504 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.22□□□□□ -1.73
SKA1Q96BD8 FAM35DP-201ENST00000323387 2712 ntBASIC4.22□□□□□ -1.73
SKA1Q96BD8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SKA1Q96BD8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SKA1Q96BD8 AL022578.1-201ENST00000439330 1433 ntBASIC4.21□□□□□ -1.73
SKA1Q96BD8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 OR5H2-201ENST00000355273 945 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 RNA5SP322-201ENST00000363617 119 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SKA1Q96BD8 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SKA1Q96BD8 MTCYBP38-201ENST00000417160 1123 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC011742.1-201ENST00000431448 434 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 MTCYBP31-201ENST00000438855 1122 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 USP9YP10-201ENST00000454868 628 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 CFTRP1-201ENST00000456646 183 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 SNORA84-201ENST00000459229 133 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms