Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC009302.1-201ENST00000417147 390 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC018634.1-201ENST00000437554 401 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 TRBV1-201ENST00000476502 284 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC034244.2-201ENST00000514668 858 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SNORA31.1-201ENST00000515993 133 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SNORA31.5-201ENST00000516190 133 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ZNF861P-201ENST00000588126 639 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 C2orf27A-204ENST00000623058 969 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SNORA70E-201ENST00000384492 135 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SAR1AP4-201ENST00000429225 591 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC096638.1-201ENST00000444678 216 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 OR4G11P-201ENST00000492842 939 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 AC025034.2-201ENST00000623264 286 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 PISRT1-201ENST00000626175 531 ntBASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
ALMS1Q8TCU4 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AC104454.1-201ENST00000421341 1401 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-1320P-201ENST00000390838 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-1269P-201ENST00000391139 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU2-37P-201ENST00000410695 177 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RPL7P10-201ENST00000417407 739 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 UBE2V2P4-201ENST00000447495 259 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-599P-201ENST00000459383 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-1193P-201ENST00000459461 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 MTND4LP22-201ENST00000508209 276 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-548P-201ENST00000517083 115 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RANP3-201ENST00000530970 276 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AC007423.1-201ENST00000605009 627 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AC023813.4-201ENST00000607580 580 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-368P-201ENST00000620928 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNU6-538P-201ENST00000622329 107 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AL445437.1-201ENST00000623157 3087 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 DPH3P2-201ENST00000422618 250 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 SNORA36C-201ENST00000384289 132 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 MIR591-201ENST00000385290 95 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RPL21P41-201ENST00000459863 264 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 RPL9P6-201ENST00000492764 598 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 CR381653.2-201ENST00000624041 768 ntBASIC1.75□□□□□ -2.13
ALMS1Q8TCU4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 CYCSP45-201ENST00000402289 315 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 RPL23AP36-201ENST00000413895 458 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 MTCO1P39-201ENST00000426148 480 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC112220.1-201ENST00000434628 355 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 RPS12P2-201ENST00000439728 269 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC091179.1-201ENST00000461606 579 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC092593.1-201ENST00000515413 1815 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC092832.1-201ENST00000422934 400 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 Z98742.2-201ENST00000431564 187 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 RN7SKP60-201ENST00000516985 239 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC083899.3-201ENST00000603413 594 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AL451074.6-201ENST00000608512 729 ntBASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ALMS1Q8TCU4 OR4G2P-202ENST00000641004 1759 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms