Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 LAP3P1-201ENST00000403648 294 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 RNU2-43P-201ENST00000410306 190 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 RNU2-52P-201ENST00000410680 190 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC024067.1-201ENST00000426199 223 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 HSPD1P21-201ENST00000436541 245 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 BX276092.4-201ENST00000452056 248 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 RN7SL160P-201ENST00000468558 284 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC112693.2-201ENST00000556538 232 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AC008749.1-201ENST00000597650 306 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AL512624.1-201ENST00000613638 469 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 AL162377.2-201ENST00000624532 337 ntBASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
EFCAB3Q8N7B9 THAP12P5-201ENST00000405864 2275 ntBASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
EFCAB3Q8N7B9 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 MAPK10-344ENST00000641718 3746 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RNU6-834P-201ENST00000362367 110 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 Y_RNA.23-201ENST00000362496 106 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 Y_RNA.33-201ENST00000362591 102 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RNU6-1155P-201ENST00000363554 107 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORD116-14-201ENST00000383894 92 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORD116-17-201ENST00000383929 92 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORD116-15-201ENST00000384445 92 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORD116-20-201ENST00000384529 92 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORD116-19-201ENST00000384729 92 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORA40.19-201ENST00000390846 128 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RPS4XP3-201ENST00000398541 413 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORA11.3-201ENST00000408471 128 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RPS15AP7-201ENST00000439294 405 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC044810.1-201ENST00000480271 711 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RPS4XP23-201ENST00000487801 237 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC008489.1-201ENST00000524271 483 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 RPL21P9-201ENST00000556149 474 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC060766.3-201ENST00000591442 263 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AC123786.2-201ENST00000603459 275 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 AL139395.1-201ENST00000603662 160 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SNORA11.6-201ENST00000619030 128 ntBASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
EFCAB3Q8N7B9 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 AL445487.1-201ENST00000415694 1580 ntBASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 AL359195.2-201ENST00000623657 4412 ntBASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 MIR412-201ENST00000362142 91 ntBASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 RNU6-384P-201ENST00000364900 104 ntBASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 Y_RNA.446-201ENST00000384178 104 ntBASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC6.88□□□□□ -1.31
EFCAB3Q8N7B9 CYP4F34P-201ENST00000425951 481 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms