Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC010301.1-201ENST00000473936 355 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AP000563.1-201ENST00000490865 758 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC012170.1-201ENST00000495139 359 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SLC25A15P5-201ENST00000508033 253 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 OR4A45P-201ENST00000529954 901 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC092470.1-201ENST00000546187 132 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LSM6P2-201ENST00000552208 177 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL132857.1-201ENST00000555180 708 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 MIR3186-201ENST00000577404 85 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 MIR5186-201ENST00000577504 120 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC015688.2-201ENST00000584523 262 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 OR4G1P-201ENST00000588632 938 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC021749.1-201ENST00000604322 607 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC069545.1-201ENST00000605671 358 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC092954.1-201ENST00000609121 445 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC024257.5-201ENST00000612739 531 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL355365.1-201ENST00000616480 294 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
C9orf40Q8IXQ3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL136310.1-201ENST00000404926 654 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 RPL23AP47-201ENST00000408017 460 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 RN7SKP111-201ENST00000410349 271 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 HSFY4P-201ENST00000415994 1181 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 KRR1P1-201ENST00000419430 803 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MTND2P16-201ENST00000419987 799 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 EEF1A1P39-201ENST00000440791 250 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL357552.1-201ENST00000445254 415 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL590399.6-201ENST00000446396 307 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 PRDX3P3-201ENST00000447765 522 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL034418.1-201ENST00000448675 860 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC104073.1-201ENST00000451988 151 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC092155.2-201ENST00000454675 477 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MTCO3P2-201ENST00000457365 171 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC134050.1-201ENST00000495088 933 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 FCF1P3-201ENST00000496394 590 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 TMEM248P1-201ENST00000510579 951 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MTCYBP37-201ENST00000510642 1133 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC087808.1-201ENST00000520501 361 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 GTF2IP8-201ENST00000560687 584 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC083899.3-201ENST00000603413 594 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AL035411.2-201ENST00000604022 421 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 RNA5SP108-201ENST00000605921 117 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC106052.1-201ENST00000608029 497 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 PABPC1P7-201ENST00000413177 1513 ntBASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf40Q8IXQ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf40Q8IXQ3 XIAPP3-201ENST00000312918 795 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms