Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 AC008993.2-201ENST00000631744 806 ntBASIC3.42□□□□□ -1.86
CCDC71Q8IV32 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC71Q8IV32 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC71Q8IV32 CEP170P1-201ENST00000502249 4587 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 NACA3P-201ENST00000359690 648 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RNU6-560P-201ENST00000364007 108 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC007066.1-201ENST00000392902 381 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL136133.1-201ENST00000413694 376 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 LUZP4P1-201ENST00000415420 344 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC092634.6-201ENST00000418558 192 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 GTF2IP23-201ENST00000423746 351 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 HSPD1P21-201ENST00000436541 245 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 Z77249.1-201ENST00000444622 1175 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 BX276092.4-201ENST00000452056 248 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC108734.3-201ENST00000481241 1165 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC093755.1-201ENST00000512950 1023 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RN7SKP265-201ENST00000516448 223 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RN7SKP277-201ENST00000516895 283 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC027309.2-201ENST00000520566 192 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AP001189.2-201ENST00000527320 189 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AADACP1-206ENST00000561502 1193 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 BNIP3P26-201ENST00000600827 554 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AL159169.3-201ENST00000608871 561 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC105429.2-201ENST00000610567 517 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC006386.1-201ENST00000619436 415 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC022509.4-201ENST00000621404 572 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC091953.5-201ENST00000622919 233 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 AC006963.1-201ENST00000624003 1052 ntBASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC71Q8IV32 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 MTCO1P12-201ENST00000414273 1543 ntBASIC3.4□□□□□ -1.86
CCDC71Q8IV32 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.4□□□□□ -1.86
CCDC71Q8IV32 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC71Q8IV32 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RNU6-525P-201ENST00000363685 104 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RNA5SP42-201ENST00000364278 115 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RNU6-1242P-201ENST00000391052 103 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AL136116.1-201ENST00000403591 381 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RPL31P2-201ENST00000413849 377 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RPL12P26-201ENST00000452430 487 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 OFD1P3Y-201ENST00000453312 783 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SNORD108-201ENST00000459332 71 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 RNU6-1225P-201ENST00000516336 65 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SNORA48.10-201ENST00000516965 160 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AP006245.1-201ENST00000522549 120 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 MTND4P33-201ENST00000556706 766 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 GTF2IP8-201ENST00000560687 584 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SNORD39.3-201ENST00000584451 71 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms