Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC012123.2-201ENST00000485809 248 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC068781.1-201ENST00000488231 618 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC135721.1-201ENST00000497954 479 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC110794.1-201ENST00000505816 425 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 Y_RNA.668-201ENST00000516233 93 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 RNU6-1016P-201ENST00000516689 94 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC007494.1-201ENST00000562293 760 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 MIR6837-201ENST00000620884 64 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 PLCE1P1-201ENST00000622094 305 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 PNPT1P2-201ENST00000456768 2050 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 OR55B1P-203ENST00000641518 2602 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 AC097461.1-201ENST00000568928 2821 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RNF135Q8IUD6 ZNF33CP-201ENST00000432492 2030 ntBASIC6.2□□□□□ -1.42
RNF135Q8IUD6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AL591135.1-201ENST00000401578 5914 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 EXOC5P1-201ENST00000510543 1969 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RN7SKP103-201ENST00000363848 320 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 Y_RNA.252-201ENST00000364556 101 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RNU6-890P-201ENST00000384121 107 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RNU6-1127P-201ENST00000384580 107 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC005042.1-201ENST00000393397 800 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RNA5SP251-201ENST00000410614 137 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RPL31P2-201ENST00000413849 377 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 HMGA1P8-201ENST00000414130 321 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 REREP1Y-201ENST00000422655 198 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 HMGB3P24-201ENST00000433260 622 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 REREP2Y-201ENST00000439103 200 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RNU6-615P-201ENST00000516065 106 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RNU6-27P-201ENST00000516146 107 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RN7SL708P-201ENST00000580952 299 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC100812.1-201ENST00000607622 580 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AL161637.1-201ENST00000622380 412 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 MIR6810-201ENST00000622701 70 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC091925.2-201ENST00000625059 256 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 MTND5P30-201ENST00000452896 1731 ntBASIC6.19□□□□□ -1.42
RNF135Q8IUD6 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RNF135Q8IUD6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 SNORD3E-201ENST00000362899 217 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 RNU6-238P-201ENST00000363313 106 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 SNORA19-201ENST00000384737 128 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 RNU6-328P-201ENST00000390887 106 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 RNU4-25P-201ENST00000410569 230 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 SDAD1P3-201ENST00000427380 333 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AC093106.2-201ENST00000428212 385 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 CALM2P2-201ENST00000428512 440 ntBASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.18□□□□□ -1.42
RNF135Q8IUD6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms