Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 AP002784.2-201ENST00000397300 549 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AL136116.1-201ENST00000403591 381 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AL645937.1-202ENST00000421799 937 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AC093422.3-201ENST00000428506 305 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 RPS4XP22-201ENST00000480755 780 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 RPL7P47-201ENST00000497299 556 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AL442163.2-201ENST00000553912 710 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AP003117.2-201ENST00000606010 545 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 AC113194.1-201ENST00000606037 500 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 RMST_8.1-201ENST00000610287 165 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
NPHP3Q7Z494 DCAF13P3-201ENST00000561147 1334 ntBASIC4.21□□□□□ -1.73
NPHP3Q7Z494 SEC63P2-201ENST00000503863 1939 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 ZNF826P-207ENST00000622273 1910 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 RNU6-468P-201ENST00000384003 109 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 RNU6-1000P-201ENST00000391066 106 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AL355615.1-201ENST00000406187 641 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AL513174.1-201ENST00000423182 629 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC011242.1-201ENST00000433596 1158 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC108734.1-201ENST00000439549 399 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 TXNP1-201ENST00000441872 371 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 HMGB1P48-201ENST00000446155 598 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 RPL37P6-202ENST00000464216 403 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC106872.2-201ENST00000494303 480 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC005351.1-201ENST00000511152 786 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NPHP3Q7Z494 OR6R2P-201ENST00000609216 300 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 AC007275.1-201ENST00000621243 671 ntBASIC4.21□□□□□ -1.74
NPHP3Q7Z494 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC138393.1-206ENST00000540997 1886 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 MIR124-3-201ENST00000384866 87 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 ELOCP6-201ENST00000429066 328 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 CST9LP2-201ENST00000437612 320 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 UBE2V1P5-201ENST00000440070 405 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 MTATP6P14-201ENST00000455189 673 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 ELOCP12-201ENST00000458706 328 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC104689.1-201ENST00000473356 768 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC117440.1-201ENST00000474107 571 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC091544.4-201ENST00000555268 342 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 MIR4425-201ENST00000580572 84 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC126365.2-201ENST00000580630 379 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC008507.2-201ENST00000588402 1176 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC011492.1-201ENST00000600023 315 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC011458.1-201ENST00000604034 617 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AL158050.2-201ENST00000605336 568 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 FRG1HP-204ENST00000617940 757 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC093875.1-201ENST00000623688 504 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AP003476.1-201ENST00000623984 516 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 AC099654.8-201ENST00000637757 681 ntBASIC4.2□□□□□ -1.74
NPHP3Q7Z494 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
NPHP3Q7Z494 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 RNU6-1293P-201ENST00000384077 107 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 MIR184-201ENST00000384962 84 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC073310.1-201ENST00000423226 1033 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC063976.3-201ENST00000426849 329 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 RPS17P11-201ENST00000474297 293 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 HMGB1P38-201ENST00000490557 577 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC114967.1-201ENST00000504890 259 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC104108.1-201ENST00000509930 412 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms