Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC012443.1-201ENST00000605605 231 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC103591.3-201ENST00000608684 209 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC084782.3-201ENST00000612282 578 ntBASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PPP4R4Q6NUP7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-1078P-201ENST00000364522 103 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.359-201ENST00000365498 102 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-348P-201ENST00000384386 107 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 Z97832.1-201ENST00000402490 328 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 Y_RNA.608-201ENST00000410647 95 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RNU6-248P-201ENST00000410720 107 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL359704.1-201ENST00000411586 781 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 OR2AM1P-201ENST00000422137 422 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RPS24P1-201ENST00000438550 371 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC069285.2-201ENST00000440210 275 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 PGBD4P3-201ENST00000440731 581 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RAC1P7-201ENST00000445367 377 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 USP9YP12-201ENST00000450481 570 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 TPT1P7-201ENST00000458300 517 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RPL21P104-201ENST00000464143 478 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL329P-201ENST00000467740 299 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 TMED11P-201ENST00000479478 690 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RPS4XP13-201ENST00000483219 789 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RN7SL97P-201ENST00000486780 299 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC020593.1-201ENST00000507399 299 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 NDUFB5P1-201ENST00000508134 564 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 COX6B1P5-201ENST00000509843 249 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC090281.1-201ENST00000523019 276 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AP003122.4-201ENST00000530980 758 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 ZNF192P1-203ENST00000565888 810 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MIR4646-201ENST00000580775 63 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MIR3611-201ENST00000584484 83 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC011447.4-201ENST00000587562 111 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 TPMTP1-201ENST00000592307 737 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AP001429.1-201ENST00000602568 530 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC015871.2-201ENST00000603605 948 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC105254.2-201ENST00000603636 436 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC112191.3-201ENST00000604371 277 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL391813.2-201ENST00000609113 322 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC026368.1-201ENST00000614934 690 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC068870.2-201ENST00000620635 389 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MIR7154-201ENST00000620673 73 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC091905.4-201ENST00000623432 202 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MTCO1P9-201ENST00000505577 1534 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AC024560.2-201ENST00000507981 1497 ntBASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
PPP4R4Q6NUP7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC009812.4-201ENST00000569134 1805 ntBASIC4.53□□□□□ -1.68
PPP4R4Q6NUP7 AC092125.1-201ENST00000562568 1995 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms