Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 RNU6-976P-201ENST00000516086 111 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AP000676.2-201ENST00000529711 301 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 RN7SL356P-201ENST00000582228 248 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC011477.5-201ENST00000586571 259 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AP000769.2-201ENST00000602344 396 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 FO393422.1-201ENST00000603908 708 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AC244107.2-201ENST00000611773 76 ntBASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.47□□□□□ -1.37
RNF20Q5VTR2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.37
RNF20Q5VTR2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF20Q5VTR2 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 ZNF807-201ENST00000328088 1707 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 RNA5SP258-201ENST00000362750 119 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SNORD113-7-201ENST00000363762 77 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SSXP10-201ENST00000402595 565 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 PSMA6P3-201ENST00000428242 164 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 RPL7AP49-201ENST00000429522 581 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 FABP7P2-201ENST00000429946 379 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC079807.1-201ENST00000429993 481 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AL591438.1-201ENST00000433508 581 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC105399.1-202ENST00000447303 205 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC011225.1-201ENST00000457751 369 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC005726.1-201ENST00000494679 427 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC026470.2-201ENST00000561492 181 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC005341.1-201ENST00000571086 708 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 MIR4504-201ENST00000577413 92 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 MIR1273E-201ENST00000581165 102 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 MIR3672-201ENST00000584290 82 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC008521.2-201ENST00000591021 259 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 RPL23AP92-201ENST00000603609 255 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC009902.3-201ENST00000606235 2172 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AC012409.4-201ENST00000612923 249 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AL390240.1-201ENST00000612950 384 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AL691477.1-201ENST00000624398 162 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 MAPK10-328ENST00000641553 4009 ntBASIC6.46□□□□□ -1.38
RNF20Q5VTR2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
RNF20Q5VTR2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 AC005005.4-201ENST00000623789 16698 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 AL442639.1-201ENST00000625030 1899 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 RNA5SP319-201ENST00000362768 119 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 RNU1-19P-201ENST00000363306 165 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 U3.7-201ENST00000363668 216 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 SNORA63.7-201ENST00000365579 123 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.45□□□□□ -1.38
RNF20Q5VTR2 RNU6-1032P-201ENST00000384100 107 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 RNU6-310P-201ENST00000384655 107 ntBASIC6.45□□□□□ -1.38
RNF20Q5VTR2 RNA5SP241-201ENST00000391326 114 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms