Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC116337.1-201ENST00000509680 687 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 SCARNA17.1-201ENST00000516211 143 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 SCARNA17.2-201ENST00000516334 143 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC090695.1-201ENST00000561269 1222 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 AP003117.2-201ENST00000606010 545 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 MIR6845-201ENST00000613182 61 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 SCARNA17.4-201ENST00000614296 143 ntBASIC3.22□□□□□ -1.89
NUP188Q5SRE5 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NUP188Q5SRE5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUP188Q5SRE5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUP188Q5SRE5 RNU6-14P-201ENST00000384630 106 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 SNORA64-201ENST00000384674 134 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.21□□□□□ -1.9
NUP188Q5SRE5 AC128657.1-201ENST00000549459 145 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 AC010620.2-201ENST00000600135 313 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 U4.3-201ENST00000621047 82 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 AC066616.2-201ENST00000559334 1481 ntBASIC3.21□□□□□ -1.9
NUP188Q5SRE5 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.21□□□□□ -1.9
NUP188Q5SRE5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
NUP188Q5SRE5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 SNORA79B-201ENST00000410557 148 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 RPL21P18-201ENST00000469899 480 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 OR5BN1P-201ENST00000532955 829 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 OR4K7P-201ENST00000580232 945 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 MIR4781-201ENST00000585250 76 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AC023043.2-201ENST00000589678 1026 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NUP188Q5SRE5 AC090229.1-201ENST00000590983 1609 ntBASIC3.2□□□□□ -1.9
NUP188Q5SRE5 RNU1-100P-201ENST00000365255 165 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 SNORA17.3-201ENST00000391159 129 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 USP9YP5-201ENST00000511770 630 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 MIR3186-201ENST00000577404 85 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 RNU6-321P-201ENST00000410912 106 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 AC069218.2-201ENST00000411665 344 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.19□□□□□ -1.9
NUP188Q5SRE5 AC103710.2-201ENST00000609912 942 ntBASIC3.19□□□□□ -1.9
NUP188Q5SRE5 MTND5P6-201ENST00000422338 1798 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NUP188Q5SRE5 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NUP188Q5SRE5 AC048351.1-201ENST00000420064 602 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.18□□□□□ -1.9
NUP188Q5SRE5 Z99127.2-201ENST00000441426 334 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 POU5F1P7-201ENST00000508759 541 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 AC107918.3-201ENST00000533272 382 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 Z99129.2-201ENST00000619967 314 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NUP188Q5SRE5 CDC27P2-201ENST00000425026 1922 ntBASIC3.18□□□□□ -1.9
NUP188Q5SRE5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 RPL9P7-201ENST00000330965 580 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 RNU2-6P-201ENST00000411404 190 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 RANP7-201ENST00000418085 644 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 AC107222.1-201ENST00000510899 637 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 AL389895.1-201ENST00000554127 252 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 MTCYBP28-201ENST00000566728 1132 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 AL133412.1-201ENST00000380194 2992 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 OR10AB1P-202ENST00000641219 1686 ntBASIC3.17□□□□□ -1.9
NUP188Q5SRE5 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUP188Q5SRE5 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 MIR489-201ENST00000384923 84 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AL162388.1-201ENST00000450912 352 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RPL21P71-201ENST00000465598 459 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC126182.1-201ENST00000478134 357 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AL845331.3-202ENST00000562856 261 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 AC006254.3-201ENST00000603353 884 ntBASIC3.16□□□□□ -1.9
NUP188Q5SRE5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms