Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC092184.1-201ENST00000625042 715 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 MIR6733-201ENST00000635723 61 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RFX7Q2KHR2 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
RFX7Q2KHR2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 RNA5SP68-201ENST00000363885 119 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 MIR518C-201ENST00000384822 101 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 MIR92A2-201ENST00000385299 75 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 RPL23AP74-201ENST00000437246 471 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AP002812.4-201ENST00000532139 286 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 AC123904.3-201ENST00000547218 814 ntBASIC3.17□□□□□ -1.9
RFX7Q2KHR2 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RFX7Q2KHR2 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 RSL24D1P4-201ENST00000400938 484 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC098592.2-201ENST00000413158 265 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 NPM1P11-201ENST00000417106 855 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AL513175.2-201ENST00000422071 443 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 COX6CP2-201ENST00000444980 225 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AL513124.1-201ENST00000450410 614 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC089999.1-201ENST00000460336 374 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AP003102.1-201ENST00000525638 661 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AL163153.1-201ENST00000554223 283 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC027176.1-201ENST00000560204 514 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AL451074.6-201ENST00000608512 729 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC073348.1-201ENST00000623002 331 ntBASIC3.16□□□□□ -1.9
RFX7Q2KHR2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.16□□□□□ -1.9
RFX7Q2KHR2 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC011816.1-201ENST00000441346 546 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 HMGN2P21-201ENST00000447764 270 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 RNA5SP320-201ENST00000516263 124 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 RNA5SP148-201ENST00000516527 94 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 OR7K1P-201ENST00000546439 926 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 MIR5092-201ENST00000583139 88 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC023043.3-201ENST00000593113 385 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 AC011468.4-201ENST00000603942 409 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 BNIP3P10-201ENST00000605360 577 ntBASIC3.15□□□□□ -1.9
RFX7Q2KHR2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.15□□□□□ -1.9
RFX7Q2KHR2 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.15□□□□□ -1.91
RFX7Q2KHR2 AL353746.1-201ENST00000566293 6881 ntBASIC3.15□□□□□ -1.91
RFX7Q2KHR2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFX7Q2KHR2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFX7Q2KHR2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
RFX7Q2KHR2 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC093084.1-201ENST00000424233 687 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 SRIP1-201ENST00000489235 288 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC008413.1-201ENST00000511864 177 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 RNU1-41P-201ENST00000516161 162 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 RNU1-48P-201ENST00000516400 162 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 BX664608.1-201ENST00000610519 487 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC002076.2-201ENST00000617362 122 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC092608.2-201ENST00000624427 218 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AL355578.1-201ENST00000607405 1328 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFX7Q2KHR2 AC009501.3-201ENST00000605001 1352 ntBASIC3.14□□□□□ -1.91
RFX7Q2KHR2 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms