Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 CIR1P1-201ENST00000524055 1133 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCH1Q13635 CKS1BP1-201ENST00000555221 240 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCH1Q13635 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.98□□□□□ -1.77
PTCH1Q13635 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.98□□□□□ -1.77
PTCH1Q13635 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.98□□□□□ -1.77
PTCH1Q13635 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PTCH1Q13635 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PTCH1Q13635 GABRG2-229ENST00000641017 3628 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.98□□□□□ -1.77
PTCH1Q13635 AC093908.1-201ENST00000623125 8092 ntBASIC3.98□□□□□ -1.77
PTCH1Q13635 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
PTCH1Q13635 OR5T3-201ENST00000303059 1023 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTCH1Q13635 RNU2-6P-201ENST00000411404 190 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.97□□□□□ -1.77
PTCH1Q13635 HMGB1P18-201ENST00000438801 619 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 HMGB3P6-201ENST00000444896 598 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.97□□□□□ -1.77
PTCH1Q13635 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCH1Q13635 OR5AK3P-201ENST00000527486 1297 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 AC007954.1-201ENST00000554198 494 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.97□□□□□ -1.77
PTCH1Q13635 AL591516.1-201ENST00000611326 274 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PTCH1Q13635 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCH1Q13635 DCAF13P1-201ENST00000495256 1330 ntBASIC3.97□□□□□ -1.77
PTCH1Q13635 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.97□□□□□ -1.77
PTCH1Q13635 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTCH1Q13635 U3.6-201ENST00000363622 211 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
PTCH1Q13635 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
PTCH1Q13635 AL139039.1-201ENST00000401900 692 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.96□□□□□ -1.77
PTCH1Q13635 AL513477.1-202ENST00000417061 214 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.96□□□□□ -1.77
PTCH1Q13635 AL162389.1-201ENST00000449233 177 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 HMGB3P8-201ENST00000449709 577 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PTCH1Q13635 AP001025.2-201ENST00000490908 477 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC006445.2-201ENST00000510061 472 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC018797.3-201ENST00000513388 1241 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 Y_RNA.676-201ENST00000516393 96 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.96□□□□□ -1.77
PTCH1Q13635 ATP5F1P5-201ENST00000526403 760 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
PTCH1Q13635 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.96□□□□□ -1.77
PTCH1Q13635 AC074029.1-201ENST00000552531 1044 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC025918.2-201ENST00000558683 763 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC233266.2-201ENST00000567067 528 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.96□□□□□ -1.77
PTCH1Q13635 AL158827.2-201ENST00000602494 330 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 NTAN1P1-201ENST00000603150 646 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC104307.1-201ENST00000616142 196 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.96□□□□□ -1.77
PTCH1Q13635 C2orf27A-204ENST00000623058 969 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AL691447.3-201ENST00000635020 330 ntBASIC3.96□□□□□ -1.77
PTCH1Q13635 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
PTCH1Q13635 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PTCH1Q13635 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTCH1Q13635 ZNF658B-202ENST00000615961 3375 ntBASIC3.96□□□□□ -1.78
PTCH1Q13635 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTCH1Q13635 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PTCH1Q13635 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PTCH1Q13635 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
PTCH1Q13635 RNU1-112P-201ENST00000364401 164 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AL583834.1-201ENST00000406943 343 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PTCH1Q13635 RN7SKP192-201ENST00000411291 327 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 TATDN1P1-201ENST00000414123 891 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 HMGB3P23-201ENST00000414981 585 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AC007000.2-201ENST00000442564 487 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 RPL23AP23-201ENST00000452590 471 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 SNRPGP5-201ENST00000456003 220 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 RPL23AP14-201ENST00000468281 468 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 RN7SKP234-201ENST00000517173 224 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AC079791.1-201ENST00000605356 973 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AL356490.1-201ENST00000623079 479 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 AC004972.1-201ENST00000623934 2209 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 XIAPP3-201ENST00000312918 795 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.95□□□□□ -1.78
PTCH1Q13635 NPM1P10-201ENST00000398310 865 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 DNAJC19P6-201ENST00000401853 280 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 RN7SKP58-201ENST00000411010 305 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 MTATP6P19-201ENST00000413797 659 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.95□□□□□ -1.78
PTCH1Q13635 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 464.2 ms