Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RAB40BQ12829 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 Y_RNA.25-201ENST00000362528 102 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RNU4-51P-201ENST00000364206 140 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RAB40BQ12829 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RAB40BQ12829 SNORA57.1-201ENST00000391227 145 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 U3.29-201ENST00000391296 212 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 ARF4P3-201ENST00000397387 509 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RPL7P60-201ENST00000397636 735 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RNU2-71P-201ENST00000411395 189 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 HMGB3P23-201ENST00000414981 585 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RPS7P15-201ENST00000415804 584 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 OR4K6P-201ENST00000416478 897 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 Z75741.2-201ENST00000417272 1167 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC007435.1-201ENST00000421086 415 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 CYCSP43-201ENST00000438233 310 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 USP9YP22-201ENST00000438971 294 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 RPL21P89-201ENST00000444021 467 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 FCF1P6-201ENST00000456841 595 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RPL23AP44-201ENST00000482216 473 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RPS4XP13-201ENST00000483219 789 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC114967.1-201ENST00000504890 259 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC096571.1-202ENST00000506634 735 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC010460.2-201ENST00000509054 677 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC108064.1-201ENST00000513791 460 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RNU6-1261P-201ENST00000517194 104 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC091163.3-201ENST00000518269 1144 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC087808.1-201ENST00000520501 361 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.1□□□□□ -1.91
RAB40BQ12829 LARP7P2-201ENST00000575306 125 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 MIR3186-201ENST00000577404 85 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 MIR5047-201ENST00000579212 100 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AL390838.2-201ENST00000602394 274 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 AC069545.1-201ENST00000605671 358 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 PART1_2.1-201ENST00000612397 250 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.1□□□□□ -1.91
RAB40BQ12829 OR1S1-201ENST00000624470 978 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.1□□□□□ -1.91
RAB40BQ12829 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AL645568.2-201ENST00000432815 1337 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RAB40BQ12829 AC244517.1-201ENST00000606030 2086 ntBASIC3.1□□□□□ -1.91
RAB40BQ12829 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RAB40BQ12829 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
RAB40BQ12829 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 MFSD8-236ENST00000641509 4050 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AP001148.1-201ENST00000624124 2359 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40BQ12829 FRG1CP-201ENST00000358464 769 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40BQ12829 RNU5E-10P-201ENST00000363506 118 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 snoZ40.1-201ENST00000364540 72 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 MIR30B-201ENST00000384850 88 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 MIR1193-201ENST00000408109 78 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 RNU2-42P-201ENST00000410697 113 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40BQ12829 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RAB40BQ12829 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AL662791.1-201ENST00000441992 928 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 HMGB3P6-201ENST00000444896 598 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 MTATP6P14-201ENST00000455189 673 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40BQ12829 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 RPL23AP62-201ENST00000463396 453 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC078785.3-201ENST00000476607 425 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AC126177.3-201ENST00000551839 688 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.09□□□□□ -1.91
RAB40BQ12829 VN1R85P-201ENST00000601587 426 ntBASIC3.09□□□□□ -1.91
RAB40BQ12829 AC067959.1-201ENST00000604334 379 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 233.1 ms