Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 ASNSP1-201ENST00000518311 1939 ntBASIC5.31□□□□□ -1.56
SSRP1Q08945 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SSRP1Q08945 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.31□□□□□ -1.56
SSRP1Q08945 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
SSRP1Q08945 OR14L1P-202ENST00000641545 3009 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC125257.1-201ENST00000560400 2930 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SSRP1Q08945 RNU6-1103P-201ENST00000384150 107 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 RNU6-339P-201ENST00000384310 107 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 U3.20-201ENST00000390909 217 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SSRP1Q08945 MTND3P17-201ENST00000416968 344 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC127526.1-201ENST00000417526 366 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AC069157.1-201ENST00000421749 137 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC133104.1-201ENST00000429100 218 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 RPL21P91-201ENST00000429231 479 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 FCF1P1-201ENST00000432690 571 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AL772161.1-201ENST00000439130 476 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC114495.1-201ENST00000441274 436 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 CEACAMP6-201ENST00000452007 574 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 COX7A2P2-201ENST00000505291 250 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 ARL2BPP6-201ENST00000512757 439 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 RN7SKP234-201ENST00000517173 224 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 FAM92A1P1-201ENST00000528023 890 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AL390726.5-202ENST00000564800 256 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AL356432.3-201ENST00000568952 465 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC068135.2-201ENST00000569293 1028 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC099489.2-201ENST00000574976 260 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 MIR6748-201ENST00000610433 71 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC022306.2-201ENST00000617563 647 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AC079597.1-201ENST00000624306 508 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC244258.1-201ENST00000637553 1071 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SSRP1Q08945 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
SSRP1Q08945 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 AC093535.2-201ENST00000624769 2326 ntBASIC5.3□□□□□ -1.56
SSRP1Q08945 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.3□□□□□ -1.56
SSRP1Q08945 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.29□□□□□ -1.56
SSRP1Q08945 Y_RNA.450-201ENST00000384198 113 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SSRP1Q08945 CALM2P3-201ENST00000400429 449 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 RN7SKP235-201ENST00000410662 305 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 Y_RNA.625-201ENST00000411256 107 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC127391.1-201ENST00000411737 98 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.29□□□□□ -1.56
SSRP1Q08945 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AC073464.1-201ENST00000429823 534 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL359265.2-201ENST00000434367 631 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC104850.1-201ENST00000435940 476 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.29□□□□□ -1.56
SSRP1Q08945 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.29□□□□□ -1.56
SSRP1Q08945 RPL31P58-201ENST00000469001 379 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 RPS3AP14-201ENST00000483907 780 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC019235.1-201ENST00000503847 207 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 HIGD1AP3-201ENST00000515857 278 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 Vault.3-201ENST00000516676 95 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 IGKV2D-36-201ENST00000518643 226 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AP000907.2-201ENST00000530827 353 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AC107954.1-201ENST00000565906 727 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 RN7SL690P-201ENST00000582087 240 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL139286.1-201ENST00000604465 483 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC055876.5-201ENST00000605667 259 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 SNORD91B-202ENST00000608459 222 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL355472.4-201ENST00000610233 626 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL161616.1-201ENST00000611867 286 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AL133173.2-201ENST00000614270 90 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SSRP1Q08945 AC005086.4-201ENST00000623065 213 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.29□□□□□ -1.56
SSRP1Q08945 MIR3688-2-201ENST00000636963 87 ntBASIC5.29□□□□□ -1.56
SSRP1Q08945 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SSRP1Q08945 ZNF33CP-201ENST00000432492 2030 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms