Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC007991.1-201ENST00000522680 631 ntBASIC3.18□□□□□ -1.9
CD47Q08722 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.18□□□□□ -1.9
CD47Q08722 AC084824.1-201ENST00000550917 1005 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC074029.1-201ENST00000552531 1044 ntBASIC3.18□□□□□ -1.9
CD47Q08722 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.18□□□□□ -1.9
CD47Q08722 AC093519.1-201ENST00000566109 298 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.18□□□□□ -1.9
CD47Q08722 AP001269.3-201ENST00000588718 329 ntBASIC3.18□□□□□ -1.9
CD47Q08722 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.18□□□□□ -1.9
CD47Q08722 AC011816.2-201ENST00000607089 556 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC092106.3-201ENST00000611308 722 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC107075.1-201ENST00000613695 314 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC073348.1-201ENST00000623002 331 ntBASIC3.18□□□□□ -1.9
CD47Q08722 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD47Q08722 AC138649.5-201ENST00000637456 137 ntBASIC3.18□□□□□ -1.9
CD47Q08722 FAM157B-203ENST00000639350 358 ntBASIC3.18□□□□□ -1.9
CD47Q08722 AC119674.1-207ENST00000641355 633 ntBASIC3.18□□□□□ -1.9
CD47Q08722 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.18□□□□□ -1.9
CD47Q08722 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CD47Q08722 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD47Q08722 AC090337.1-201ENST00000579651 2074 ntBASIC3.18□□□□□ -1.9
CD47Q08722 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.18□□□□□ -1.9
CD47Q08722 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD47Q08722 AC091152.2-201ENST00000591628 2569 ntBASIC3.17□□□□□ -1.9
CD47Q08722 Z99496.1-201ENST00000469424 1477 ntBASIC3.17□□□□□ -1.9
CD47Q08722 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD47Q08722 GABPAP-201ENST00000419271 1356 ntBASIC3.17□□□□□ -1.9
CD47Q08722 ELL2P4-201ENST00000446870 1376 ntBASIC3.17□□□□□ -1.9
CD47Q08722 MTND5P27-201ENST00000428871 1720 ntBASIC3.17□□□□□ -1.9
CD47Q08722 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CD47Q08722 RNU6-1066P-201ENST00000363573 105 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RNU1-85P-201ENST00000364127 164 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RNA5SP479-201ENST00000364858 117 ntBASIC3.17□□□□□ -1.9
CD47Q08722 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 SUGT1P1-201ENST00000379514 476 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RNU6-636P-201ENST00000384598 107 ntBASIC3.17□□□□□ -1.9
CD47Q08722 U8.11-201ENST00000384699 133 ntBASIC3.17□□□□□ -1.9
CD47Q08722 U8.12-201ENST00000384701 133 ntBASIC3.17□□□□□ -1.9
CD47Q08722 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC007390.1-201ENST00000415722 356 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RPS3AP9-201ENST00000417027 792 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC008065.1-201ENST00000428525 348 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 KCTD10P1-201ENST00000434203 625 ntBASIC3.17□□□□□ -1.9
CD47Q08722 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 HMGB3P11-201ENST00000440127 604 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
CD47Q08722 Z77249.1-201ENST00000444622 1175 ntBASIC3.17□□□□□ -1.9
CD47Q08722 PTENP1-201ENST00000447117 1215 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC004022.1-201ENST00000447766 1066 ntBASIC3.17□□□□□ -1.9
CD47Q08722 U8.18-201ENST00000459285 133 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC023598.1-201ENST00000472521 361 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AL136126.1-201ENST00000473603 402 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC005726.1-201ENST00000494679 427 ntBASIC3.17□□□□□ -1.9
CD47Q08722 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC091951.3-201ENST00000504093 246 ntBASIC3.17□□□□□ -1.9
CD47Q08722 KCTD9P5-201ENST00000504141 1170 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.17□□□□□ -1.9
CD47Q08722 AC023141.12-201ENST00000512399 199 ntBASIC3.17□□□□□ -1.9
CD47Q08722 HIGD1AP3-201ENST00000515857 278 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RN7SKP265-201ENST00000516448 223 ntBASIC3.17□□□□□ -1.9
CD47Q08722 RN7SKP234-201ENST00000517173 224 ntBASIC3.17□□□□□ -1.9
CD47Q08722 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 RANP9-201ENST00000519957 271 ntBASIC3.17□□□□□ -1.9
CD47Q08722 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.17□□□□□ -1.9
CD47Q08722 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.17□□□□□ -1.9
CD47Q08722 MED28P5-201ENST00000528254 438 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.17□□□□□ -1.9
CD47Q08722 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.17□□□□□ -1.9
CD47Q08722 GTF2IP8-201ENST00000560687 584 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC138915.2-201ENST00000569776 97 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC074051.3-201ENST00000570238 358 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC091057.2-201ENST00000602594 792 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC069545.1-201ENST00000605671 358 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC092954.1-201ENST00000609121 445 ntBASIC3.17□□□□□ -1.9
CD47Q08722 XIST_intron.1-201ENST00000619444 68 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC013470.4-201ENST00000619978 986 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC068787.1-201ENST00000623908 691 ntBASIC3.17□□□□□ -1.9
CD47Q08722 AC005183.1-201ENST00000603687 1979 ntBASIC3.17□□□□□ -1.9
CD47Q08722 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CD47Q08722 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CD47Q08722 MTND5P28-201ENST00000438005 1594 ntBASIC3.17□□□□□ -1.9
CD47Q08722 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.16□□□□□ -1.9
CD47Q08722 NMD3P1-201ENST00000439704 1488 ntBASIC3.16□□□□□ -1.9
CD47Q08722 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.16□□□□□ -1.9
CD47Q08722 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CD47Q08722 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CD47Q08722 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.16□□□□□ -1.9
CD47Q08722 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.16□□□□□ -1.9
CD47Q08722 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CD47Q08722 NACA3P-201ENST00000359690 648 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms