Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 MTCYBP15-201ENST00000433123 1127 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 AC114755.5-201ENST00000447760 831 ntBASIC3.36□□□□□ -1.87
CBX1P83916 RPL23AP20-201ENST00000447965 421 ntBASIC3.36□□□□□ -1.87
CBX1P83916 NECAP1P2-201ENST00000455668 727 ntBASIC3.36□□□□□ -1.87
CBX1P83916 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 RPS7P7-201ENST00000463499 571 ntBASIC3.36□□□□□ -1.87
CBX1P83916 PABPC1P3-201ENST00000469174 459 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC010301.1-201ENST00000473936 355 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.36□□□□□ -1.87
CBX1P83916 VPS26AP1-201ENST00000483197 979 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC026979.1-201ENST00000492525 396 ntBASIC3.36□□□□□ -1.87
CBX1P83916 CEACAMP10-202ENST00000495431 496 ntBASIC3.36□□□□□ -1.87
CBX1P83916 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CBX1P83916 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.36□□□□□ -1.87
CBX1P83916 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 OR4R2P-201ENST00000530815 597 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.36□□□□□ -1.87
CBX1P83916 SETP2-201ENST00000553886 926 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.36□□□□□ -1.87
CBX1P83916 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.36□□□□□ -1.87
CBX1P83916 AC053481.4-201ENST00000583164 216 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AP001542.2-201ENST00000593141 364 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
CBX1P83916 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 AC131902.3-201ENST00000611767 581 ntBASIC3.36□□□□□ -1.87
CBX1P83916 MIR6716-201ENST00000613413 80 ntBASIC3.36□□□□□ -1.87
CBX1P83916 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 AC009318.4-201ENST00000620496 486 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AC068880.4-201ENST00000623082 495 ntBASIC3.36□□□□□ -1.87
CBX1P83916 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AL512506.2-201ENST00000624472 458 ntBASIC3.36□□□□□ -1.87
CBX1P83916 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.36□□□□□ -1.87
CBX1P83916 RLIMP1-201ENST00000339626 1680 ntBASIC3.36□□□□□ -1.87
CBX1P83916 MTND4P34-201ENST00000572715 1371 ntBASIC3.36□□□□□ -1.87
CBX1P83916 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
CBX1P83916 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 RNU6-50P-201ENST00000362356 103 ntBASIC3.35□□□□□ -1.87
CBX1P83916 RNU6-251P-201ENST00000363235 104 ntBASIC3.35□□□□□ -1.87
CBX1P83916 RNU6-839P-201ENST00000363347 108 ntBASIC3.35□□□□□ -1.87
CBX1P83916 SNORD82-201ENST00000365530 70 ntBASIC3.35□□□□□ -1.87
CBX1P83916 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 DEFB109C-201ENST00000382575 264 ntBASIC3.35□□□□□ -1.87
CBX1P83916 DEFB109B-201ENST00000382656 264 ntBASIC3.35□□□□□ -1.87
CBX1P83916 SNORA70C-201ENST00000384538 135 ntBASIC3.35□□□□□ -1.87
CBX1P83916 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CBX1P83916 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.35□□□□□ -1.87
CBX1P83916 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 RPL7P2-201ENST00000427639 268 ntBASIC3.35□□□□□ -1.87
CBX1P83916 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.35□□□□□ -1.87
CBX1P83916 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 U3.44-201ENST00000458938 192 ntBASIC3.35□□□□□ -1.87
CBX1P83916 GAPDHP39-201ENST00000481866 979 ntBASIC3.35□□□□□ -1.87
CBX1P83916 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.35□□□□□ -1.87
CBX1P83916 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 AL163153.1-201ENST00000554223 283 ntBASIC3.35□□□□□ -1.87
CBX1P83916 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.35□□□□□ -1.87
CBX1P83916 ZNF971P-201ENST00000562068 1249 ntBASIC3.35□□□□□ -1.87
CBX1P83916 AC087481.2-201ENST00000565492 330 ntBASIC3.35□□□□□ -1.87
CBX1P83916 AC120057.2-201ENST00000571520 271 ntBASIC3.35□□□□□ -1.87
CBX1P83916 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.35□□□□□ -1.87
CBX1P83916 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.35□□□□□ -1.87
CBX1P83916 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CBX1P83916 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CBX1P83916 AL445567.2-201ENST00000618935 498 ntBASIC3.35□□□□□ -1.87
CBX1P83916 VN1R7P-201ENST00000619242 903 ntBASIC3.35□□□□□ -1.87
CBX1P83916 AC092650.2-201ENST00000619984 902 ntBASIC3.35□□□□□ -1.87
CBX1P83916 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.35□□□□□ -1.87
CBX1P83916 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CBX1P83916 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CBX1P83916 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.35□□□□□ -1.87
CBX1P83916 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CBX1P83916 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.34□□□□□ -1.87
CBX1P83916 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CBX1P83916 AL121657.1-201ENST00000327215 531 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AL355615.1-201ENST00000406187 641 ntBASIC3.34□□□□□ -1.87
CBX1P83916 Y_RNA.625-201ENST00000411256 107 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.34□□□□□ -1.87
CBX1P83916 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
CBX1P83916 AC104332.2-201ENST00000429959 156 ntBASIC3.34□□□□□ -1.87
CBX1P83916 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms