Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.74□□□□□ -2.13
PRKDCP78527 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.74□□□□□ -2.13
PRKDCP78527 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.74□□□□□ -2.13
PRKDCP78527 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.74□□□□□ -2.13
PRKDCP78527 MIR4635-201ENST00000583759 79 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.74□□□□□ -2.13
PRKDCP78527 YWHAEP7-203ENST00000622054 312 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 GTF2H2B-203ENST00000508065 1432 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 RPS7P9-201ENST00000414704 586 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 ST13P20-201ENST00000447996 1065 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.74□□□□□ -2.13
PRKDCP78527 RN7SL75P-201ENST00000461926 281 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 AC106872.2-201ENST00000494303 480 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.74□□□□□ -2.13
PRKDCP78527 OR5H3P-201ENST00000502817 919 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.74□□□□□ -2.13
PRKDCP78527 AC106730.3-201ENST00000624568 641 ntBASIC1.74□□□□□ -2.13
PRKDCP78527 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRKDCP78527 MIR378A-201ENST00000362177 66 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AC020633.1-201ENST00000468439 2247 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AC072039.1-201ENST00000477611 581 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AC026436.1-201ENST00000510537 270 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 RNA5SP380-201ENST00000517190 98 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 FAM60DP-201ENST00000524174 632 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AL360085.1-201ENST00000604713 532 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
PRKDCP78527 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 RNU6-1140P-201ENST00000410517 106 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.73□□□□□ -2.13
PRKDCP78527 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.73□□□□□ -2.13
PRKDCP78527 SNORA4-201ENST00000584302 138 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
PRKDCP78527 AC069528.2-201ENST00000624849 1991 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 AC138915.3-201ENST00000562908 1389 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 RPL9P7-201ENST00000330965 580 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 RNA5SP456-201ENST00000364002 114 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 IGKV2D-23-201ENST00000518179 286 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 AC090115.4-201ENST00000609970 188 ntBASIC1.73□□□□□ -2.13
PRKDCP78527 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
PRKDCP78527 RNU1-87P-201ENST00000363727 170 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.72□□□□□ -2.13
PRKDCP78527 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.72□□□□□ -2.13
PRKDCP78527 ATG3P1-201ENST00000419507 911 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PRKDCP78527 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PRKDCP78527 CR769767.1-201ENST00000436337 346 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 RPS26P24-201ENST00000497656 331 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC026412.2-201ENST00000512270 1075 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC1.72□□□□□ -2.13
PRKDCP78527 AC004825.2-201ENST00000616634 455 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
PRKDCP78527 RNU6-457P-201ENST00000363999 107 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 RNU2-22P-201ENST00000411266 212 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AL365396.1-201ENST00000430854 671 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 RPL21P41-201ENST00000459863 264 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.72□□□□□ -2.13
PRKDCP78527 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 AL022099.1-201ENST00000604551 712 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC078899.5-201ENST00000612475 178 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC073869.7-201ENST00000640874 297 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PRKDCP78527 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.72□□□□□ -2.13
PRKDCP78527 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
PRKDCP78527 POLR2J4-204ENST00000418424 324 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 RNA5SP76-201ENST00000516277 87 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.72□□□□□ -2.13
PRKDCP78527 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.72□□□□□ -2.13
PRKDCP78527 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.72□□□□□ -2.13
PRKDCP78527 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 AP004372.1-201ENST00000604842 844 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 AC092628.2-201ENST00000622492 339 ntBASIC1.72□□□□□ -2.13
PRKDCP78527 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.72□□□□□ -2.13
PRKDCP78527 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PRKDCP78527 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PRKDCP78527 MIR613-201ENST00000385248 95 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 PPIAP17-201ENST00000438507 471 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC105918.1-201ENST00000474399 838 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.71□□□□□ -2.14
PRKDCP78527 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.71□□□□□ -2.14
PRKDCP78527 ELOCP31-201ENST00000540463 467 ntBASIC1.71□□□□□ -2.14
PRKDCP78527 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms