Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC010374.2-201ENST00000512933 535 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC026801.2-201ENST00000515352 425 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.61□□□□□ -1.83
CCNA1P78396 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.61□□□□□ -1.83
CCNA1P78396 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.61□□□□□ -1.83
CCNA1P78396 AC092470.1-201ENST00000546187 132 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 RPL12P50-201ENST00000603116 116 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC006023.1-201ENST00000603944 259 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC008121.2-201ENST00000614647 523 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC105227.2-201ENST00000615075 605 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 AL162233.1-201ENST00000620014 944 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CCNA1P78396 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC104820.1-201ENST00000624183 307 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 MTND5P11-201ENST00000511037 1812 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
CCNA1P78396 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CCNA1P78396 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNA1P78396 AC092326.2-201ENST00000624772 1561 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 RNU6-252P-201ENST00000363232 107 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 RNU6-374P-201ENST00000364146 108 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNA1P78396 RNU6-1151P-201ENST00000384684 107 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNA1P78396 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNA1P78396 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC073508.1-201ENST00000428866 656 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNA1P78396 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNA1P78396 Z99127.3-201ENST00000448158 395 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC112492.1-201ENST00000449607 712 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 MTND5P8-201ENST00000449817 1083 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNA1P78396 HMGB1P15-201ENST00000453854 435 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC015724.1-201ENST00000478577 156 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC022784.5-201ENST00000522241 437 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNA1P78396 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC233266.2-201ENST00000567067 528 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNA1P78396 CYCSP41-201ENST00000616920 296 ntBASIC3.6□□□□□ -1.83
CCNA1P78396 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCNA1P78396 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CCNA1P78396 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNA1P78396 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNA1P78396 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CCNA1P78396 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNA1P78396 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCNA1P78396 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNA1P78396 RNU6-629P-201ENST00000384061 103 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.59□□□□□ -1.83
CCNA1P78396 UBE2V1P9-201ENST00000414760 368 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.83
CCNA1P78396 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNA1P78396 AC002075.2-201ENST00000425207 252 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AC096632.1-201ENST00000427395 310 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 ARPC3P2-201ENST00000457786 533 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 AC010265.1-201ENST00000513509 211 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 IGKV2D-36-201ENST00000518643 226 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.59□□□□□ -1.83
CCNA1P78396 NDUFB9P3-201ENST00000521269 501 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNA1P78396 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 AC022069.1-201ENST00000582910 658 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNA1P78396 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNA1P78396 AL109653.1-201ENST00000603091 248 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 PRELID3BP8-201ENST00000604148 295 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNA1P78396 FRG1HP-204ENST00000617940 757 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.59□□□□□ -1.83
CCNA1P78396 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 AL590396.2-201ENST00000636511 1041 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 ZNF826P-207ENST00000622273 1910 ntBASIC3.59□□□□□ -1.83
CCNA1P78396 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNA1P78396 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CCNA1P78396 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CCNA1P78396 MAPK10-362ENST00000641864 4484 ntBASIC3.59□□□□□ -1.84
CCNA1P78396 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
CCNA1P78396 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.59□□□□□ -1.84
CCNA1P78396 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms