Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.15□□□□□ -1.91
TPM4P67936 SERPINE4P-201ENST00000554978 281 ntBASIC3.15□□□□□ -1.91
TPM4P67936 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.15□□□□□ -1.91
TPM4P67936 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM4P67936 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.15□□□□□ -1.91
TPM4P67936 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AC008962.1-201ENST00000605729 304 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM4P67936 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.15□□□□□ -1.91
TPM4P67936 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TPM4P67936 AL645568.2-201ENST00000432815 1337 ntBASIC3.15□□□□□ -1.91
TPM4P67936 AL136520.1-201ENST00000600311 1322 ntBASIC3.15□□□□□ -1.91
TPM4P67936 MTND4P8-201ENST00000514997 1362 ntBASIC3.14□□□□□ -1.91
TPM4P67936 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TPM4P67936 METTL21EP-201ENST00000298105 713 ntBASIC3.14□□□□□ -1.91
TPM4P67936 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 SNORA14A-201ENST00000364773 135 ntBASIC3.14□□□□□ -1.91
TPM4P67936 RNA5SP479-201ENST00000364858 117 ntBASIC3.14□□□□□ -1.91
TPM4P67936 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 RNU6-851P-201ENST00000384565 107 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM4P67936 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM4P67936 MTATP6P4-201ENST00000427725 675 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC022018.1-201ENST00000430685 241 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC109583.1-201ENST00000432156 268 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC091390.1-201ENST00000433904 331 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM4P67936 RPL23AP20-201ENST00000447965 421 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC034236.1-201ENST00000469891 373 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC003982.1-202ENST00000469928 248 ntBASIC3.14□□□□□ -1.91
TPM4P67936 GAPDHP39-201ENST00000481866 979 ntBASIC3.14□□□□□ -1.91
TPM4P67936 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM4P67936 ARL4AP2-201ENST00000507378 601 ntBASIC3.14□□□□□ -1.91
TPM4P67936 KLHL2P1-201ENST00000508691 521 ntBASIC3.14□□□□□ -1.91
TPM4P67936 HMGB1P47-201ENST00000511281 589 ntBASIC3.14□□□□□ -1.91
TPM4P67936 RN7SKP157-201ENST00000516174 282 ntBASIC3.14□□□□□ -1.91
TPM4P67936 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 AL133271.1-201ENST00000538229 291 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.14□□□□□ -1.91
TPM4P67936 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.14□□□□□ -1.91
TPM4P67936 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.14□□□□□ -1.91
TPM4P67936 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM4P67936 BNIP3P11-201ENST00000603878 563 ntBASIC3.14□□□□□ -1.91
TPM4P67936 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TPM4P67936 AC090617.7-201ENST00000623952 126 ntBASIC3.14□□□□□ -1.91
TPM4P67936 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.14□□□□□ -1.91
TPM4P67936 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TPM4P67936 AC092593.1-201ENST00000515413 1815 ntBASIC3.14□□□□□ -1.91
TPM4P67936 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
TPM4P67936 AC096644.4-201ENST00000563417 2912 ntBASIC3.13□□□□□ -1.91
TPM4P67936 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM4P67936 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM4P67936 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TPM4P67936 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
TPM4P67936 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.13□□□□□ -1.91
TPM4P67936 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
TPM4P67936 SNORD21-201ENST00000383953 95 ntBASIC3.13□□□□□ -1.91
TPM4P67936 GSTA8P-201ENST00000404253 637 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AC073264.1-201ENST00000411508 416 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM4P67936 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM4P67936 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TPM4P67936 FO393419.3-201ENST00000428741 282 ntBASIC3.13□□□□□ -1.91
TPM4P67936 RPS20P5-201ENST00000434808 360 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM4P67936 SNRPEP4-201ENST00000435815 279 ntBASIC3.13□□□□□ -1.91
TPM4P67936 YWHAZP8-201ENST00000436935 731 ntBASIC3.13□□□□□ -1.91
TPM4P67936 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TPM4P67936 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.13□□□□□ -1.91
TPM4P67936 RPS23P3-201ENST00000470993 430 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AC087190.1-201ENST00000484462 480 ntBASIC3.13□□□□□ -1.91
TPM4P67936 RPL32P34-201ENST00000486380 400 ntBASIC3.13□□□□□ -1.91
TPM4P67936 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM4P67936 AC105914.1-201ENST00000511798 226 ntBASIC3.13□□□□□ -1.91
TPM4P67936 SNORA31.1-201ENST00000515993 133 ntBASIC3.13□□□□□ -1.91
TPM4P67936 SNORA31.5-201ENST00000516190 133 ntBASIC3.13□□□□□ -1.91
TPM4P67936 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.13□□□□□ -1.91
TPM4P67936 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.13□□□□□ -1.91
TPM4P67936 BNIP3P5-201ENST00000562290 498 ntBASIC3.13□□□□□ -1.91
TPM4P67936 MIR4504-201ENST00000577413 92 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AP001029.3-201ENST00000588063 596 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
TPM4P67936 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
TPM4P67936 AP000676.4-201ENST00000624659 623 ntBASIC3.13□□□□□ -1.91
TPM4P67936 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.13□□□□□ -1.91
TPM4P67936 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TPM4P67936 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM4P67936 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 AL512646.1-201ENST00000269395 1077 ntBASIC3.12□□□□□ -1.91
TPM4P67936 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 VTRNA1-1-201ENST00000363120 99 ntBASIC3.12□□□□□ -1.91
TPM4P67936 SNORA62.3-201ENST00000365110 153 ntBASIC3.12□□□□□ -1.91
TPM4P67936 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM4P67936 SNORA54-201ENST00000384281 123 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AL139095.1-201ENST00000404326 391 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms