Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RPS3AP61247 Y_RNA.234-201ENST00000364409 97 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 Y_RNA.302-201ENST00000364997 102 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.95□□□□□ -1.78
RPS3AP61247 RNU4-25P-201ENST00000410569 230 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 MIR1911-201ENST00000410783 80 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AL137014.1-201ENST00000420490 1226 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC011233.1-201ENST00000422812 283 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC234781.2-201ENST00000426370 994 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 MTATP6P17-201ENST00000431030 672 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 CBX1P1-201ENST00000440184 427 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.95□□□□□ -1.78
RPS3AP61247 DHFRP3-201ENST00000455595 559 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 ARPC3P2-201ENST00000457786 533 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 RN7SL585P-201ENST00000470538 280 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC069499.1-201ENST00000489433 509 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 NIPA2P2-201ENST00000496376 1083 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.95□□□□□ -1.78
RPS3AP61247 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.95□□□□□ -1.78
RPS3AP61247 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.95□□□□□ -1.78
RPS3AP61247 RNU2-58P-201ENST00000516403 183 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 RNU6-1073P-201ENST00000517182 106 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.95□□□□□ -1.78
RPS3AP61247 PHBP17-201ENST00000528576 541 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 OR5AP1P-201ENST00000529730 940 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 CR383656.7-201ENST00000548164 174 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 MTND3P12-201ENST00000559068 328 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 RPL23AP97-201ENST00000568955 471 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 IPO5P1-202ENST00000600039 287 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AL031176.1-201ENST00000604554 466 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AL049634.3-201ENST00000604968 457 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC009039.2-201ENST00000624524 529 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 AC019226.2-201ENST00000625973 424 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RPS3AP61247 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RPS3AP61247 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.95□□□□□ -1.78
RPS3AP61247 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
RPS3AP61247 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
RPS3AP61247 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
RPS3AP61247 RNU6-433P-201ENST00000363216 104 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 RNU6-777P-201ENST00000364265 104 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 RNA5SP175-201ENST00000364275 119 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 SNORD3H-201ENST00000384486 214 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 RN7SKP266-201ENST00000410232 287 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 RNU2-47P-201ENST00000410649 186 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 RAB28P1-201ENST00000411517 641 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.94□□□□□ -1.78
RPS3AP61247 AC009237.5-201ENST00000414271 501 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.94□□□□□ -1.78
RPS3AP61247 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.94□□□□□ -1.78
RPS3AP61247 MTND1P20-201ENST00000430341 950 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 ABCF2P2-201ENST00000450549 296 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 PPIAP15-201ENST00000479662 484 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 LTV1P1-201ENST00000510683 1237 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 FTH1P9-201ENST00000513251 355 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 RNA5SP309-201ENST00000516670 106 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 AC087276.1-201ENST00000529659 480 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 AC068587.4-201ENST00000533893 186 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.94□□□□□ -1.78
RPS3AP61247 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 AC090616.2-202ENST00000584248 222 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.94□□□□□ -1.78
RPS3AP61247 AC007687.1-201ENST00000602704 304 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 Z99129.2-201ENST00000619967 314 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.94□□□□□ -1.78
RPS3AP61247 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.94□□□□□ -1.78
RPS3AP61247 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 AC116096.1-201ENST00000566804 2314 ntBASIC3.94□□□□□ -1.78
RPS3AP61247 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.94□□□□□ -1.78
RPS3AP61247 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.94□□□□□ -1.78
RPS3AP61247 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
RPS3AP61247 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RPS3AP61247 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.93□□□□□ -1.78
RPS3AP61247 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPS3AP61247 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RPS3AP61247 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
RPS3AP61247 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPS3AP61247 AC007685.1-201ENST00000329806 452 ntBASIC3.93□□□□□ -1.78
RPS3AP61247 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RPS3AP61247 MIR331-201ENST00000362302 94 ntBASIC3.93□□□□□ -1.78
RPS3AP61247 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
RPS3AP61247 RNU6-359P-201ENST00000365466 108 ntBASIC3.93□□□□□ -1.78
RPS3AP61247 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPS3AP61247 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RPS3AP61247 SNORA74C-2-201ENST00000411179 201 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms