Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH6P55285 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH6P55285 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH6P55285 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH6P55285 AC010733.2-201ENST00000589496 5702 ntBASIC3.26□□□□□ -1.89
CDH6P55285 MTND5P31-201ENST00000419366 1374 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AL136164.4-201ENST00000625013 2135 ntBASIC3.26□□□□□ -1.89
CDH6P55285 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH6P55285 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
CDH6P55285 SNORA63.1-201ENST00000362493 131 ntBASIC3.26□□□□□ -1.89
CDH6P55285 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH6P55285 RNU6-339P-201ENST00000384310 107 ntBASIC3.26□□□□□ -1.89
CDH6P55285 RNA5SP120-201ENST00000410900 112 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AC233981.1-201ENST00000423224 461 ntBASIC3.26□□□□□ -1.89
CDH6P55285 RPP40P1-201ENST00000426762 456 ntBASIC3.26□□□□□ -1.89
CDH6P55285 FTH1P1-201ENST00000437933 532 ntBASIC3.26□□□□□ -1.89
CDH6P55285 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH6P55285 AL591503.2-201ENST00000442314 1005 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH6P55285 RPL7P5-201ENST00000471472 736 ntBASIC3.26□□□□□ -1.89
CDH6P55285 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH6P55285 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AL358832.1-201ENST00000497800 389 ntBASIC3.26□□□□□ -1.89
CDH6P55285 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH6P55285 RNU6-1102P-201ENST00000516149 96 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.26□□□□□ -1.89
CDH6P55285 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH6P55285 AC068657.1-201ENST00000520807 306 ntBASIC3.26□□□□□ -1.89
CDH6P55285 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH6P55285 AC023824.3-201ENST00000569003 562 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH6P55285 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH6P55285 AL606834.2-201ENST00000602954 668 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AL355812.1-201ENST00000603215 216 ntBASIC3.26□□□□□ -1.89
CDH6P55285 DPRXP5-201ENST00000604662 539 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AL451074.6-201ENST00000608512 729 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AL392048.1-201ENST00000613946 534 ntBASIC3.26□□□□□ -1.89
CDH6P55285 AC105227.2-201ENST00000615075 605 ntBASIC3.26□□□□□ -1.89
CDH6P55285 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH6P55285 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH6P55285 AC073055.1-201ENST00000456901 1621 ntBASIC3.26□□□□□ -1.89
CDH6P55285 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH6P55285 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 AC024341.1-201ENST00000526444 1552 ntBASIC3.25□□□□□ -1.89
CDH6P55285 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDH6P55285 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDH6P55285 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDH6P55285 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
CDH6P55285 RNU6-792P-201ENST00000363490 107 ntBASIC3.25□□□□□ -1.89
CDH6P55285 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 RNVU1-14-201ENST00000384770 164 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AL354719.1-201ENST00000406535 843 ntBASIC3.25□□□□□ -1.89
CDH6P55285 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 RNU4-78P-201ENST00000410940 126 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AL158050.1-201ENST00000416077 457 ntBASIC3.25□□□□□ -1.89
CDH6P55285 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH6P55285 HSFY1P1-201ENST00000423928 1178 ntBASIC3.25□□□□□ -1.89
CDH6P55285 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 AL353705.1-201ENST00000433468 480 ntBASIC3.25□□□□□ -1.89
CDH6P55285 RPS12P18-201ENST00000442381 270 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH6P55285 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH6P55285 AC005002.1-201ENST00000447458 540 ntBASIC3.25□□□□□ -1.89
CDH6P55285 SSXP4-201ENST00000451349 245 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 AC091179.1-201ENST00000461606 579 ntBASIC3.25□□□□□ -1.89
CDH6P55285 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
CDH6P55285 RPS27P29-201ENST00000463110 252 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC010285.1-201ENST00000470580 392 ntBASIC3.25□□□□□ -1.89
CDH6P55285 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 MTCO3P44-201ENST00000510977 541 ntBASIC3.25□□□□□ -1.89
CDH6P55285 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 RNU6-416P-201ENST00000516265 103 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH6P55285 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CDH6P55285 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 AC074051.3-201ENST00000570238 358 ntBASIC3.25□□□□□ -1.89
CDH6P55285 MIR5680-201ENST00000577577 84 ntBASIC3.25□□□□□ -1.89
CDH6P55285 MIR3944-201ENST00000581277 108 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.25□□□□□ -1.89
CDH6P55285 PRELID3BP8-201ENST00000604148 295 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH6P55285 AC068722.2-201ENST00000618734 544 ntBASIC3.25□□□□□ -1.89
CDH6P55285 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH6P55285 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.25□□□□□ -1.89
CDH6P55285 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH6P55285 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH6P55285 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH6P55285 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms