Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MTND4P16-201ENST00000466108 1367 ntBASIC4.45□□□□□ -1.7
COPB1P53618 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.45□□□□□ -1.7
COPB1P53618 SNORD35B-201ENST00000363660 87 ntBASIC4.45□□□□□ -1.7
COPB1P53618 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
COPB1P53618 RNU2-28P-201ENST00000410457 189 ntBASIC4.45□□□□□ -1.7
COPB1P53618 ELOCP19-201ENST00000411919 318 ntBASIC4.45□□□□□ -1.7
COPB1P53618 CHIAP3-201ENST00000423668 1133 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.45□□□□□ -1.7
COPB1P53618 AC010975.2-201ENST00000427781 588 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.45□□□□□ -1.7
COPB1P53618 YWHAZP8-201ENST00000436935 731 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AL354710.1-201ENST00000453641 246 ntBASIC4.45□□□□□ -1.7
COPB1P53618 APOOP2-201ENST00000461561 539 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC097493.1-201ENST00000463958 372 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.45□□□□□ -1.7
COPB1P53618 AC041039.1-201ENST00000485656 536 ntBASIC4.45□□□□□ -1.7
COPB1P53618 RPL29P14-201ENST00000495837 428 ntBASIC4.45□□□□□ -1.7
COPB1P53618 VWA8P1-201ENST00000510889 176 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.45□□□□□ -1.7
COPB1P53618 RN7SKP96-201ENST00000516948 297 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.45□□□□□ -1.7
COPB1P53618 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 AC091489.2-201ENST00000566263 604 ntBASIC4.45□□□□□ -1.7
COPB1P53618 MIR5684-201ENST00000585074 65 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.45□□□□□ -1.7
COPB1P53618 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.45□□□□□ -1.7
COPB1P53618 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 AP000403.1-201ENST00000603349 851 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC243773.3-201ENST00000613270 256 ntBASIC4.45□□□□□ -1.7
COPB1P53618 MIR6716-201ENST00000613413 80 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC013476.2-201ENST00000614456 459 ntBASIC4.45□□□□□ -1.7
COPB1P53618 MIR7151-201ENST00000617477 60 ntBASIC4.45□□□□□ -1.7
COPB1P53618 AC231657.1-201ENST00000624313 397 ntBASIC4.45□□□□□ -1.7
COPB1P53618 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
COPB1P53618 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.45□□□□□ -1.7
COPB1P53618 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COPB1P53618 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.45□□□□□ -1.7
COPB1P53618 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 Y_RNA.6-201ENST00000362350 114 ntBASIC4.44□□□□□ -1.7
COPB1P53618 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.44□□□□□ -1.7
COPB1P53618 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 AL732292.1-201ENST00000426692 226 ntBASIC4.44□□□□□ -1.7
COPB1P53618 COX6B1P7-201ENST00000430845 235 ntBASIC4.44□□□□□ -1.7
COPB1P53618 AC092427.1-201ENST00000439177 601 ntBASIC4.44□□□□□ -1.7
COPB1P53618 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 MTCO1P48-201ENST00000448024 1096 ntBASIC4.44□□□□□ -1.7
COPB1P53618 DNAJC19P1-201ENST00000455312 319 ntBASIC4.44□□□□□ -1.7
COPB1P53618 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 RNA5SP216-201ENST00000516111 123 ntBASIC4.44□□□□□ -1.7
COPB1P53618 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.44□□□□□ -1.7
COPB1P53618 AC023575.1-201ENST00000580510 358 ntBASIC4.44□□□□□ -1.7
COPB1P53618 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 AC083760.1-201ENST00000589621 670 ntBASIC4.44□□□□□ -1.7
COPB1P53618 AC068790.5-201ENST00000602741 355 ntBASIC4.44□□□□□ -1.7
COPB1P53618 AC091805.2-201ENST00000603848 235 ntBASIC4.44□□□□□ -1.7
COPB1P53618 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPB1P53618 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COPB1P53618 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.44□□□□□ -1.7
COPB1P53618 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPB1P53618 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.43□□□□□ -1.7
COPB1P53618 TEX21P-201ENST00000447107 1476 ntBASIC4.43□□□□□ -1.7
COPB1P53618 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 AC107081.3-201ENST00000612715 2034 ntBASIC4.43□□□□□ -1.7
COPB1P53618 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPB1P53618 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COPB1P53618 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms