Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SMARCA4P51532 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SMARCA4P51532 RNA5SP88-201ENST00000365560 109 ntBASIC4.15□□□□□ -1.74
SMARCA4P51532 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SMARCA4P51532 SNORA80E-201ENST00000384744 137 ntBASIC4.15□□□□□ -1.74
SMARCA4P51532 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.15□□□□□ -1.74
SMARCA4P51532 MIR6766-201ENST00000622641 72 ntBASIC4.15□□□□□ -1.74
SMARCA4P51532 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA4P51532 AL512646.1-201ENST00000269395 1077 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA4P51532 RN7SKP32-201ENST00000410167 303 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 RNU2-22P-201ENST00000411266 212 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA4P51532 NIPA2P2-201ENST00000496376 1083 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.14□□□□□ -1.75
SMARCA4P51532 MTCYBP19-201ENST00000517463 1124 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 MTCYBP20-201ENST00000524239 1129 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA4P51532 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.14□□□□□ -1.75
SMARCA4P51532 AC012119.1-201ENST00000603184 222 ntBASIC4.14□□□□□ -1.75
SMARCA4P51532 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SMARCA4P51532 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SMARCA4P51532 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SMARCA4P51532 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA4P51532 RNU1-87P-201ENST00000363727 170 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA4P51532 RNA5SP129-201ENST00000410276 118 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 RPL23AP11-201ENST00000475260 469 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.13□□□□□ -1.75
SMARCA4P51532 AC104237.2-201ENST00000612456 443 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 CR589904.2-201ENST00000612533 440 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 VN1R9P-201ENST00000614184 867 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA4P51532 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA4P51532 RNU6-1159P-201ENST00000362933 107 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.13□□□□□ -1.75
SMARCA4P51532 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA4P51532 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.13□□□□□ -1.75
SMARCA4P51532 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC4.13□□□□□ -1.75
SMARCA4P51532 GMCL1P2-201ENST00000605230 823 ntBASIC4.13□□□□□ -1.75
SMARCA4P51532 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SMARCA4P51532 DCAF13P3-201ENST00000561147 1334 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
SMARCA4P51532 Y_RNA.118-201ENST00000363300 101 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 RNU1-91P-201ENST00000364746 163 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCA4P51532 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCA4P51532 AL592045.1-201ENST00000429867 352 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCA4P51532 HMGB3P8-201ENST00000449709 577 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 RPL23AP14-201ENST00000468281 468 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.12□□□□□ -1.75
SMARCA4P51532 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.12□□□□□ -1.75
SMARCA4P51532 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.12□□□□□ -1.75
SMARCA4P51532 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.12□□□□□ -1.75
SMARCA4P51532 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCA4P51532 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
SMARCA4P51532 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 Y_RNA.40-201ENST00000362645 93 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 Y_RNA.595-201ENST00000410403 105 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 RNU2-6P-201ENST00000411404 190 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 RPL31P45-201ENST00000419532 356 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 PTP4A1P7-201ENST00000423476 514 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 RPS6P12-201ENST00000432491 726 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCA4P51532 COX6CP2-201ENST00000444980 225 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.11□□□□□ -1.75
SMARCA4P51532 AC116337.1-201ENST00000509680 687 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 RFPL1S-203ENST00000539579 330 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCA4P51532 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.11□□□□□ -1.75
SMARCA4P51532 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SMARCA4P51532 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCA4P51532 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
SMARCA4P51532 AC080128.1-201ENST00000474389 1917 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 AC093311.1-201ENST00000506586 2021 ntBASIC4.11□□□□□ -1.75
SMARCA4P51532 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.1□□□□□ -1.75
SMARCA4P51532 RN7SKP210-201ENST00000459176 261 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 RPL21P71-201ENST00000465598 459 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.1□□□□□ -1.75
SMARCA4P51532 MIR4498-201ENST00000577599 66 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 AC023813.4-201ENST00000607580 580 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCA4P51532 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SMARCA4P51532 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCA4P51532 RNU2-2P-201ENST00000410396 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 AL513175.2-201ENST00000422071 443 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 AP000926.3-201ENST00000497201 299 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMARCA4P51532 AP001521.1-201ENST00000609150 300 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.15-201ENST00000611544 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.16-201ENST00000613119 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.12-201ENST00000613778 191 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.20-201ENST00000613956 192 ntBASIC4.1□□□□□ -1.75
SMARCA4P51532 U2.9-201ENST00000615427 191 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms