Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC079395.1-201ENST00000510981 262 ntBASIC3.8□□□□□ -1.8
LHX1P48742 FABP5P12-201ENST00000515543 389 ntBASIC3.8□□□□□ -1.8
LHX1P48742 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 SLC2A13P1-201ENST00000531560 322 ntBASIC3.8□□□□□ -1.8
LHX1P48742 OR6C73P-201ENST00000546432 358 ntBASIC3.8□□□□□ -1.8
LHX1P48742 CCNG2P1-201ENST00000549521 1000 ntBASIC3.8□□□□□ -1.8
LHX1P48742 NBEAP1-201ENST00000554452 979 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.8□□□□□ -1.8
LHX1P48742 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 OR4K7P-201ENST00000580232 945 ntBASIC3.8□□□□□ -1.8
LHX1P48742 MIR3922-201ENST00000585192 84 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC061975.8-201ENST00000587058 721 ntBASIC3.8□□□□□ -1.8
LHX1P48742 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 AC131235.4-201ENST00000609288 620 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC097478.2-201ENST00000610572 514 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC090116.1-201ENST00000615679 446 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AC121761.2-201ENST00000617300 689 ntBASIC3.8□□□□□ -1.8
LHX1P48742 U73479.1-201ENST00000618062 168 ntBASIC3.8□□□□□ -1.8
LHX1P48742 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
LHX1P48742 AC009318.4-201ENST00000620496 486 ntBASIC3.8□□□□□ -1.8
LHX1P48742 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX1P48742 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LHX1P48742 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.8□□□□□ -1.8
LHX1P48742 ZNF876P-202ENST00000398732 1485 ntBASIC3.79□□□□□ -1.8
LHX1P48742 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 ZNF37BP-203ENST00000452306 1352 ntBASIC3.79□□□□□ -1.8
LHX1P48742 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LHX1P48742 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.79□□□□□ -1.8
LHX1P48742 SNRPEP2-201ENST00000397592 279 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AL450338.1-201ENST00000407987 512 ntBASIC3.79□□□□□ -1.8
LHX1P48742 U3.39-201ENST00000408569 239 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC068533.2-201ENST00000411872 306 ntBASIC3.79□□□□□ -1.8
LHX1P48742 RPL22P18-201ENST00000417197 377 ntBASIC3.79□□□□□ -1.8
LHX1P48742 OFD1P18Y-201ENST00000420889 959 ntBASIC3.79□□□□□ -1.8
LHX1P48742 XKRYP1-201ENST00000423438 492 ntBASIC3.79□□□□□ -1.8
LHX1P48742 YME1L1P1-201ENST00000429435 297 ntBASIC3.79□□□□□ -1.8
LHX1P48742 XKRYP2-201ENST00000432915 492 ntBASIC3.79□□□□□ -1.8
LHX1P48742 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 FGF7P5-201ENST00000441829 291 ntBASIC3.79□□□□□ -1.8
LHX1P48742 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
LHX1P48742 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.79□□□□□ -1.8
LHX1P48742 RPL12P26-201ENST00000452430 487 ntBASIC3.79□□□□□ -1.8
LHX1P48742 RBMY2UP-201ENST00000453474 324 ntBASIC3.79□□□□□ -1.8
LHX1P48742 NECAP1P2-201ENST00000455668 727 ntBASIC3.79□□□□□ -1.8
LHX1P48742 RN7SL93P-201ENST00000463035 293 ntBASIC3.79□□□□□ -1.8
LHX1P48742 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.79□□□□□ -1.8
LHX1P48742 ACTG1P13-201ENST00000486987 1043 ntBASIC3.79□□□□□ -1.8
LHX1P48742 HMGB1P28-201ENST00000507778 552 ntBASIC3.79□□□□□ -1.8
LHX1P48742 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.79□□□□□ -1.8
LHX1P48742 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX1P48742 SNORA70.18-201ENST00000516696 98 ntBASIC3.79□□□□□ -1.8
LHX1P48742 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.79□□□□□ -1.8
LHX1P48742 EEF1A1P37-201ENST00000522748 715 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
LHX1P48742 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 AC010198.2-201ENST00000550612 259 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.79□□□□□ -1.8
LHX1P48742 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.79□□□□□ -1.8
LHX1P48742 AC074050.1-201ENST00000563247 211 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AL360157.1-201ENST00000565962 87 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX1P48742 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.79□□□□□ -1.8
LHX1P48742 AC083899.3-201ENST00000603413 594 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC009220.3-201ENST00000604318 586 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC080013.3-201ENST00000606839 578 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC092106.3-201ENST00000611308 722 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC015967.1-201ENST00000619893 476 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC011330.2-201ENST00000621680 635 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AL357559.1-201ENST00000622228 274 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AC116618.1-201ENST00000634617 774 ntBASIC3.79□□□□□ -1.8
LHX1P48742 AL392088.2-201ENST00000637607 285 ntBASIC3.79□□□□□ -1.8
LHX1P48742 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LHX1P48742 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LHX1P48742 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX1P48742 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LHX1P48742 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
LHX1P48742 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 CEP170P1-201ENST00000502249 4587 ntBASIC3.78□□□□□ -1.8
LHX1P48742 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.8
LHX1P48742 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 AL049781.1-201ENST00000623195 3585 ntBASIC3.78□□□□□ -1.8
LHX1P48742 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LHX1P48742 SNRPEP3-201ENST00000338402 276 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms