Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.97□□□□□ -1.93
CXCL12P48061 AL591516.1-201ENST00000611326 274 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AL163051.2-201ENST00000618976 735 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
CXCL12P48061 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.97□□□□□ -1.93
CXCL12P48061 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CXCL12P48061 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CXCL12P48061 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CXCL12P48061 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.96□□□□□ -1.93
CXCL12P48061 AC007496.3-201ENST00000624987 3443 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 ZNF826P-207ENST00000622273 1910 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CXCL12P48061 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CXCL12P48061 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL12P48061 EI24P2-201ENST00000397776 1076 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 RSL24D1P4-201ENST00000400938 484 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 RNU4-27P-201ENST00000410889 139 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 HMGB3P31-201ENST00000413333 595 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AL121882.1-201ENST00000422893 417 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AL121890.1-201ENST00000435457 205 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 RPL7P36-201ENST00000444633 681 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 SNORD109B-201ENST00000458961 67 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 SNORD109A-201ENST00000459128 67 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 FABP5P12-201ENST00000515543 389 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CXCL12P48061 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2.96□□□□□ -1.94
CXCL12P48061 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.96□□□□□ -1.94
CXCL12P48061 AC079600.2-201ENST00000550076 130 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL12P48061 AC009097.3-201ENST00000563557 1018 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL12P48061 AC024153.1-201ENST00000603103 365 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AL512506.1-201ENST00000613918 449 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AC231759.1-201ENST00000616455 597 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.96□□□□□ -1.94
CXCL12P48061 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.96□□□□□ -1.94
CXCL12P48061 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL12P48061 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL12P48061 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.96□□□□□ -1.94
CXCL12P48061 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.96□□□□□ -1.94
CXCL12P48061 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL12P48061 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL12P48061 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL12P48061 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CXCL12P48061 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL12P48061 AL592494.2-201ENST00000425455 1548 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CXCL12P48061 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL12P48061 PTGES3P2-201ENST00000407942 482 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AC004022.2-201ENST00000413824 193 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AL445183.3-201ENST00000414168 502 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AC019070.1-201ENST00000415008 1024 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL12P48061 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.95□□□□□ -1.94
CXCL12P48061 AC002075.2-201ENST00000425207 252 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL12P48061 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL12P48061 YWHAEP4-201ENST00000505390 198 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL12P48061 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.95□□□□□ -1.94
CXCL12P48061 AC139103.1-201ENST00000534696 1030 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.95□□□□□ -1.94
CXCL12P48061 AL389895.1-201ENST00000554127 252 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 ATP5F1P7-201ENST00000567330 760 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.95□□□□□ -1.94
CXCL12P48061 AP000919.1-202ENST00000581139 1264 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AC097460.3-201ENST00000623099 442 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL12P48061 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.95□□□□□ -1.94
CXCL12P48061 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
CXCL12P48061 AL049780.3-201ENST00000624612 1583 ntBASIC2.95□□□□□ -1.94
CXCL12P48061 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 MTCO1P18-201ENST00000455518 1419 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
CXCL12P48061 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 MIR30E-201ENST00000362104 92 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 RNA5SP391-201ENST00000363456 119 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 RNA5SP27-201ENST00000363839 119 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CXCL12P48061 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 RNU2-52P-201ENST00000410680 190 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL12P48061 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL12P48061 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL12P48061 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL12P48061 FTH1P1-201ENST00000437933 532 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 RPS7P5-201ENST00000441482 581 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC068135.1-201ENST00000446164 246 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms