Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC005000.2-201ENST00000605468 310 ntBASIC3.99□□□□□ -1.77
MTHFRP42898 AL513477.2-201ENST00000607858 568 ntBASIC3.99□□□□□ -1.77
MTHFRP42898 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.99□□□□□ -1.77
MTHFRP42898 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.99□□□□□ -1.77
MTHFRP42898 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.99□□□□□ -1.77
MTHFRP42898 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
MTHFRP42898 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
MTHFRP42898 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
MTHFRP42898 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 RNA5SP50-201ENST00000363731 107 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 RNU6-374P-201ENST00000364146 108 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 RNU6-657P-201ENST00000383904 107 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 MT-TC-201ENST00000387405 66 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 RNU6-837P-201ENST00000391056 108 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 Z74696.2-201ENST00000436514 498 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 TPTE2P3-201ENST00000441562 1189 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.98□□□□□ -1.77
MTHFRP42898 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 RFC5P1-201ENST00000454419 874 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 SNORA59A-201ENST00000459326 152 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.98□□□□□ -1.77
MTHFRP42898 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 RN7SL601P-201ENST00000471221 293 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 NCOR1P1-202ENST00000486162 291 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 MTCYBP37-201ENST00000510642 1133 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
MTHFRP42898 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.98□□□□□ -1.77
MTHFRP42898 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.98□□□□□ -1.77
MTHFRP42898 AL355812.1-201ENST00000603215 216 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC013470.4-201ENST00000619978 986 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC022509.4-201ENST00000621404 572 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC006963.1-201ENST00000624003 1052 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AC090897.3-201ENST00000636973 1157 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 AL392088.2-201ENST00000637607 285 ntBASIC3.98□□□□□ -1.77
MTHFRP42898 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.98□□□□□ -1.77
MTHFRP42898 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.98□□□□□ -1.77
MTHFRP42898 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
MTHFRP42898 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 AC116096.1-201ENST00000566804 2314 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 RNU4-92P-201ENST00000363783 136 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.97□□□□□ -1.77
MTHFRP42898 Y_RNA.408-201ENST00000383987 102 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.97□□□□□ -1.77
MTHFRP42898 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.97□□□□□ -1.77
MTHFRP42898 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC092641.1-201ENST00000440229 772 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC004022.1-201ENST00000447766 1066 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC073387.1-201ENST00000453261 709 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 snoU13.3-201ENST00000459441 104 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC010301.1-201ENST00000473936 355 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC013828.1-201ENST00000481845 158 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 RNU6-1225P-201ENST00000516336 65 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.97□□□□□ -1.77
MTHFRP42898 TRAV15-201ENST00000556680 249 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC020914.6-201ENST00000594327 272 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AL390838.2-201ENST00000602394 274 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC010591.1-201ENST00000603941 649 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC091946.2-201ENST00000606105 291 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 RNU1-30P-201ENST00000606575 163 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC073348.1-201ENST00000623002 331 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AL359715.5-201ENST00000623431 443 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.97□□□□□ -1.77
MTHFRP42898 MIR3651-201ENST00000630427 90 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.97□□□□□ -1.77
MTHFRP42898 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
MTHFRP42898 MKKS-204ENST00000639674 192 ntBASIC3.97□□□□□ -1.77
MTHFRP42898 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
MTHFRP42898 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms