Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 RNU6-1151P-201ENST00000384684 107 ntBASIC4.06□□□□□ -1.76
USP8P40818 RNU6-1300P-201ENST00000391046 108 ntBASIC4.06□□□□□ -1.76
USP8P40818 BOLA3P4-201ENST00000418151 400 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC098592.1-201ENST00000419352 333 ntBASIC4.06□□□□□ -1.76
USP8P40818 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AC004975.1-201ENST00000428733 208 ntBASIC4.06□□□□□ -1.76
USP8P40818 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 YWHAZP8-201ENST00000436935 731 ntBASIC4.06□□□□□ -1.76
USP8P40818 MTCYBP34-201ENST00000439552 670 ntBASIC4.06□□□□□ -1.76
USP8P40818 RPS15AP1-201ENST00000457423 391 ntBASIC4.06□□□□□ -1.76
USP8P40818 RPL5P24-201ENST00000463742 885 ntBASIC4.06□□□□□ -1.76
USP8P40818 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
USP8P40818 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.06□□□□□ -1.76
USP8P40818 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.06□□□□□ -1.76
USP8P40818 SETP14-201ENST00000497538 873 ntBASIC4.06□□□□□ -1.76
USP8P40818 RPF2P2-201ENST00000504693 896 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.06□□□□□ -1.76
USP8P40818 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.06□□□□□ -1.76
USP8P40818 AC109445.1-201ENST00000512356 383 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP8P40818 RN7SKP31-201ENST00000516354 278 ntBASIC4.06□□□□□ -1.76
USP8P40818 RN7SKP83-201ENST00000516512 178 ntBASIC4.06□□□□□ -1.76
USP8P40818 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
USP8P40818 AP004242.1-201ENST00000533701 349 ntBASIC4.06□□□□□ -1.76
USP8P40818 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.06□□□□□ -1.76
USP8P40818 OR8R1P-201ENST00000543943 764 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 AC135628.1-201ENST00000568867 534 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC138915.2-201ENST00000569776 97 ntBASIC4.06□□□□□ -1.76
USP8P40818 AP005136.1-201ENST00000579765 429 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.06□□□□□ -1.76
USP8P40818 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 LLPHP1-201ENST00000603571 367 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC069304.3-201ENST00000603938 1084 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC011816.2-201ENST00000607089 556 ntBASIC4.06□□□□□ -1.76
USP8P40818 AL392048.1-201ENST00000613946 534 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC079684.1-201ENST00000621405 437 ntBASIC4.06□□□□□ -1.76
USP8P40818 MIR6810-201ENST00000622701 70 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC073348.1-201ENST00000623002 331 ntBASIC4.06□□□□□ -1.76
USP8P40818 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.06□□□□□ -1.76
USP8P40818 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.05□□□□□ -1.76
USP8P40818 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 AL133383.2-201ENST00000622958 2336 ntBASIC4.05□□□□□ -1.76
USP8P40818 MTND5P31-201ENST00000419366 1374 ntBASIC4.05□□□□□ -1.76
USP8P40818 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 AL512646.1-201ENST00000269395 1077 ntBASIC4.05□□□□□ -1.76
USP8P40818 MIR30B-201ENST00000384850 88 ntBASIC4.05□□□□□ -1.76
USP8P40818 SNORA3.3-201ENST00000408712 125 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 AC016907.1-201ENST00000419483 435 ntBASIC4.05□□□□□ -1.76
USP8P40818 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.05□□□□□ -1.76
USP8P40818 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.05□□□□□ -1.76
USP8P40818 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 UBE2D3P4-201ENST00000441973 436 ntBASIC4.05□□□□□ -1.76
USP8P40818 AL591503.2-201ENST00000442314 1005 ntBASIC4.05□□□□□ -1.76
USP8P40818 RPS29P31-201ENST00000446147 164 ntBASIC4.05□□□□□ -1.76
USP8P40818 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.05□□□□□ -1.76
USP8P40818 PNPLA4P1-201ENST00000458328 305 ntBASIC4.05□□□□□ -1.76
USP8P40818 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 MTND3P7-201ENST00000474435 343 ntBASIC4.05□□□□□ -1.76
USP8P40818 RPS3AP43-201ENST00000479743 781 ntBASIC4.05□□□□□ -1.76
USP8P40818 VN1R105P-201ENST00000486595 910 ntBASIC4.05□□□□□ -1.76
USP8P40818 LINC00888-204ENST00000487386 421 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC093267.1-201ENST00000489176 961 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC078817.1-201ENST00000492623 435 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.05□□□□□ -1.76
USP8P40818 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.05□□□□□ -1.76
USP8P40818 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.05□□□□□ -1.76
USP8P40818 RNU6-232P-201ENST00000517144 64 ntBASIC4.05□□□□□ -1.76
USP8P40818 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.05□□□□□ -1.76
USP8P40818 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.05□□□□□ -1.76
USP8P40818 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.05□□□□□ -1.76
USP8P40818 AP001207.1-201ENST00000524051 481 ntBASIC4.05□□□□□ -1.76
USP8P40818 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.05□□□□□ -1.76
USP8P40818 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.05□□□□□ -1.76
USP8P40818 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.05□□□□□ -1.76
USP8P40818 MIR4286-201ENST00000580651 93 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC053481.4-201ENST00000583164 216 ntBASIC4.05□□□□□ -1.76
USP8P40818 VN1R90P-201ENST00000595717 726 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC064807.4-201ENST00000607201 407 ntBASIC4.05□□□□□ -1.76
USP8P40818 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.05□□□□□ -1.76
USP8P40818 AC018816.2-201ENST00000621460 353 ntBASIC4.05□□□□□ -1.76
USP8P40818 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.05□□□□□ -1.76
USP8P40818 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.05□□□□□ -1.76
USP8P40818 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP8P40818 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms