Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC104073.1-201ENST00000451988 151 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 SNRPGP9-201ENST00000456025 225 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 RPS4XP18-201ENST00000495480 763 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD12P35452 RNU2-58P-201ENST00000516403 183 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD12P35452 CYCSP2-201ENST00000558168 301 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 MIR4429-201ENST00000580105 73 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXD12P35452 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD12P35452 BPIFA4P-203ENST00000603168 689 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC079587.1-201ENST00000603846 277 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC243773.3-201ENST00000613270 256 ntBASIC4.41□□□□□ -1.7
HOXD12P35452 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXD12P35452 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HOXD12P35452 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD12P35452 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
HOXD12P35452 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD12P35452 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXD12P35452 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXD12P35452 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
HOXD12P35452 MAPK10-253ENST00000641010 4072 ntBASIC4.4□□□□□ -1.7
HOXD12P35452 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.7
HOXD12P35452 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.4□□□□□ -1.7
HOXD12P35452 AC007685.1-201ENST00000329806 452 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 RNU6-433P-201ENST00000363216 104 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXD12P35452 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD12P35452 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 MIR1183-201ENST00000408856 89 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 Y_RNA.599-201ENST00000410489 109 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 MTCO1P21-201ENST00000416634 589 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 AL451062.2-201ENST00000427515 271 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD12P35452 BTF3P10-201ENST00000433415 495 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 COX6CP12-201ENST00000446748 202 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 EPS15P1-201ENST00000448836 336 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 TRGVB-201ENST00000453257 471 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC092757.1-201ENST00000467293 467 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC034236.1-201ENST00000469891 373 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 RPS27AP13-201ENST00000498403 237 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD12P35452 CBX3P3-201ENST00000508108 532 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD12P35452 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.4□□□□□ -1.71
HOXD12P35452 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
HOXD12P35452 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 AC022880.1-201ENST00000534017 973 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC005868.1-201ENST00000536421 331 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD12P35452 AL389895.1-201ENST00000554127 252 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 PCMTD1P2-201ENST00000565017 355 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 MIR4286-201ENST00000580651 93 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXD12P35452 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXD12P35452 AC107214.2-201ENST00000608204 634 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC104073.3-201ENST00000610942 955 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC068792.1-201ENST00000621354 417 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AC112484.5-201ENST00000624189 228 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 EOGT-210ENST00000615922 1931 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AL161912.2-201ENST00000565707 3007 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXD12P35452 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HOXD12P35452 AC130650.2-201ENST00000618736 2403 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXD12P35452 LARP1BP1-201ENST00000506036 1359 ntBASIC4.4□□□□□ -1.71
HOXD12P35452 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.4□□□□□ -1.71
HOXD12P35452 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
HOXD12P35452 PABPC1P9-201ENST00000426076 1612 ntBASIC4.39□□□□□ -1.71
HOXD12P35452 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HOXD12P35452 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.39□□□□□ -1.71
HOXD12P35452 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.39□□□□□ -1.71
HOXD12P35452 DHX9P1-201ENST00000436565 3076 ntBASIC4.39□□□□□ -1.71
HOXD12P35452 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD12P35452 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD12P35452 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD12P35452 SNORA31-201ENST00000362607 130 ntBASIC4.39□□□□□ -1.71
HOXD12P35452 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.39□□□□□ -1.71
HOXD12P35452 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXD12P35452 RNU6-723P-201ENST00000383973 107 ntBASIC4.39□□□□□ -1.71
HOXD12P35452 RNY3P10-201ENST00000384764 102 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms