Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.92□□□□□ -1.94
RPA3P35244 TPTE2P1-204ENST00000435256 593 ntBASIC2.92□□□□□ -1.94
RPA3P35244 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPA3P35244 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.92□□□□□ -1.94
RPA3P35244 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.92□□□□□ -1.94
RPA3P35244 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC233982.1-201ENST00000451247 436 ntBASIC2.92□□□□□ -1.94
RPA3P35244 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.92□□□□□ -1.94
RPA3P35244 NECAP1P2-201ENST00000455668 727 ntBASIC2.92□□□□□ -1.94
RPA3P35244 RPL5P24-201ENST00000463742 885 ntBASIC2.92□□□□□ -1.94
RPA3P35244 RPL27AP5-201ENST00000469428 449 ntBASIC2.92□□□□□ -1.94
RPA3P35244 RPL23AP11-201ENST00000475260 469 ntBASIC2.92□□□□□ -1.94
RPA3P35244 OR2A20P-203ENST00000498397 1268 ntBASIC2.92□□□□□ -1.94
RPA3P35244 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.92□□□□□ -1.94
RPA3P35244 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.92□□□□□ -1.94
RPA3P35244 HMGB1P22-201ENST00000505315 124 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC008885.2-201ENST00000509506 930 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.92□□□□□ -1.94
RPA3P35244 AC010265.1-201ENST00000513509 211 ntBASIC2.92□□□□□ -1.94
RPA3P35244 GMPSP1-201ENST00000514075 579 ntBASIC2.92□□□□□ -1.94
RPA3P35244 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.92□□□□□ -1.94
RPA3P35244 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.92□□□□□ -1.94
RPA3P35244 EIF5A2P1-201ENST00000564027 460 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC107954.1-201ENST00000565906 727 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC090312.2-201ENST00000582687 378 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.92□□□□□ -1.94
RPA3P35244 AC125494.3-201ENST00000602759 455 ntBASIC2.92□□□□□ -1.94
RPA3P35244 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.92□□□□□ -1.94
RPA3P35244 AL355493.4-201ENST00000618530 292 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AL590240.3-201ENST00000621416 943 ntBASIC2.92□□□□□ -1.94
RPA3P35244 AC010338.1-201ENST00000621823 717 ntBASIC2.92□□□□□ -1.94
RPA3P35244 LRRC77P-213ENST00000637727 880 ntBASIC2.92□□□□□ -1.94
RPA3P35244 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
RPA3P35244 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPA3P35244 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RPA3P35244 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
RPA3P35244 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RPA3P35244 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RPA3P35244 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.91□□□□□ -1.94
RPA3P35244 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
RPA3P35244 RNU6-543P-201ENST00000362576 108 ntBASIC2.91□□□□□ -1.94
RPA3P35244 RNA5SP295-201ENST00000362655 121 ntBASIC2.91□□□□□ -1.94
RPA3P35244 SNORA54-201ENST00000384281 123 ntBASIC2.91□□□□□ -1.94
RPA3P35244 MIR491-201ENST00000384877 84 ntBASIC2.91□□□□□ -1.94
RPA3P35244 MIR1250-201ENST00000408098 113 ntBASIC2.91□□□□□ -1.94
RPA3P35244 RNU2-17P-201ENST00000410290 190 ntBASIC2.91□□□□□ -1.94
RPA3P35244 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 YWHAZP7-201ENST00000436906 631 ntBASIC2.91□□□□□ -1.94
RPA3P35244 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.91□□□□□ -1.94
RPA3P35244 AC117440.1-201ENST00000474107 571 ntBASIC2.91□□□□□ -1.94
RPA3P35244 RNA5SP341-201ENST00000516261 117 ntBASIC2.91□□□□□ -1.94
RPA3P35244 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.91□□□□□ -1.94
RPA3P35244 IGHV3-76-201ENST00000522465 295 ntBASIC2.91□□□□□ -1.94
RPA3P35244 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPA3P35244 AC109635.4-202ENST00000531666 412 ntBASIC2.91□□□□□ -1.94
RPA3P35244 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 H3F3AP1-201ENST00000559984 334 ntBASIC2.91□□□□□ -1.94
RPA3P35244 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.91□□□□□ -1.94
RPA3P35244 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RPA3P35244 AC018926.3-201ENST00000618841 406 ntBASIC2.91□□□□□ -1.94
RPA3P35244 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RPA3P35244 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.91□□□□□ -1.94
RPA3P35244 AC000403.1-201ENST00000613696 3585 ntBASIC2.9□□□□□ -1.94
RPA3P35244 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.9□□□□□ -1.94
RPA3P35244 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RPA3P35244 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RPA3P35244 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RPA3P35244 RNU6-263P-201ENST00000363811 107 ntBASIC2.9□□□□□ -1.95
RPA3P35244 RNU6-374P-201ENST00000364146 108 ntBASIC2.9□□□□□ -1.95
RPA3P35244 SNORA11C-201ENST00000408532 129 ntBASIC2.9□□□□□ -1.95
RPA3P35244 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.9□□□□□ -1.95
RPA3P35244 AC127537.2-201ENST00000439258 465 ntBASIC2.9□□□□□ -1.95
RPA3P35244 UBE2V1P5-201ENST00000440070 405 ntBASIC2.9□□□□□ -1.95
RPA3P35244 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.9□□□□□ -1.95
RPA3P35244 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
RPA3P35244 SSXP4-201ENST00000451349 245 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AC104308.1-201ENST00000454621 333 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AC008280.2-201ENST00000455473 307 ntBASIC2.9□□□□□ -1.95
RPA3P35244 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
RPA3P35244 RN7SL297P-201ENST00000483161 293 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
RPA3P35244 AC008565.1-201ENST00000509046 885 ntBASIC2.9□□□□□ -1.95
RPA3P35244 CIR1P1-201ENST00000524055 1133 ntBASIC2.9□□□□□ -1.95
RPA3P35244 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.9□□□□□ -1.95
RPA3P35244 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.9□□□□□ -1.95
RPA3P35244 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.9□□□□□ -1.95
RPA3P35244 AC015871.2-201ENST00000603605 948 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AC091488.1-201ENST00000604239 660 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AL161756.2-201ENST00000604597 246 ntBASIC2.9□□□□□ -1.95
RPA3P35244 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.9□□□□□ -1.95
RPA3P35244 AC091953.5-201ENST00000622919 233 ntBASIC2.9□□□□□ -1.95
RPA3P35244 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.9□□□□□ -1.95
RPA3P35244 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.9□□□□□ -1.95
RPA3P35244 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
RPA3P35244 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RPA3P35244 AP003122.5-201ENST00000527668 3766 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms