Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 AC018630.1-201ENST00000541376 925 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.28□□□□□ -1.88
CASQ1P31415 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.28□□□□□ -1.88
CASQ1P31415 AC010620.2-201ENST00000600135 313 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AC022387.2-201ENST00000604050 448 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AP000787.2-201ENST00000604432 568 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AC015849.2-201ENST00000605738 409 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 AC090116.1-201ENST00000615679 446 ntBASIC3.28□□□□□ -1.88
CASQ1P31415 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.28□□□□□ -1.88
CASQ1P31415 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CASQ1P31415 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.27□□□□□ -1.89
CASQ1P31415 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CASQ1P31415 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CASQ1P31415 VTRNA1-1-201ENST00000363120 99 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 RNU5D-1-201ENST00000363299 116 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CASQ1P31415 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 UBE2V1P9-201ENST00000414760 368 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC008280.1-201ENST00000418851 412 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC005189.1-201ENST00000431286 310 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC122718.1-201ENST00000439448 744 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.27□□□□□ -1.89
CASQ1P31415 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 RPL26P28-201ENST00000451325 435 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 RPL9P33-201ENST00000484311 566 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 RPL21P13-201ENST00000488305 481 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.27□□□□□ -1.89
CASQ1P31415 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 OR5G4P-201ENST00000525251 760 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.27□□□□□ -1.89
CASQ1P31415 GTF2IP22-201ENST00000554443 182 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.27□□□□□ -1.89
CASQ1P31415 CCDC58P3-201ENST00000590792 430 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.27□□□□□ -1.89
CASQ1P31415 AC106900.2-201ENST00000604994 317 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AC106028.5-201ENST00000610332 395 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AL020991.1-201ENST00000612314 373 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 AL356118.1-201ENST00000635272 1078 ntBASIC3.27□□□□□ -1.89
CASQ1P31415 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CASQ1P31415 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CASQ1P31415 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.26□□□□□ -1.89
CASQ1P31415 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.26□□□□□ -1.89
CASQ1P31415 RNU6-1074P-201ENST00000383995 104 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CASQ1P31415 AL590004.2-201ENST00000404787 371 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 RNU2-25P-201ENST00000411041 191 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 BX323014.1-201ENST00000412876 237 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.26□□□□□ -1.89
CASQ1P31415 AC234775.1-201ENST00000454247 670 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 AP001025.2-201ENST00000490908 477 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.26□□□□□ -1.89
CASQ1P31415 PRELID3BP4-201ENST00000515476 571 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 RNU6-826P-201ENST00000516827 104 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 AC138761.3-201ENST00000579993 334 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 AC022916.3-201ENST00000592961 742 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.26□□□□□ -1.89
CASQ1P31415 AC079880.2-201ENST00000603790 1213 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 AL137246.1-201ENST00000607072 977 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 STMN1P1-201ENST00000617809 440 ntBASIC3.26□□□□□ -1.89
CASQ1P31415 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.26□□□□□ -1.89
CASQ1P31415 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
CASQ1P31415 ASNSP3-201ENST00000451989 1306 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CASQ1P31415 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CASQ1P31415 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CASQ1P31415 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CASQ1P31415 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 RPL32P3-201ENST00000359025 275 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 MIR585-201ENST00000384887 94 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 RNU6-712P-201ENST00000410558 100 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AC092745.2-202ENST00000411880 369 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.25□□□□□ -1.89
CASQ1P31415 AC099677.1-201ENST00000420575 175 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 FNDC3CP-201ENST00000420795 1155 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.25□□□□□ -1.89
CASQ1P31415 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.25□□□□□ -1.89
CASQ1P31415 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 RPS29P6-201ENST00000438196 145 ntBASIC3.25□□□□□ -1.89
CASQ1P31415 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.25□□□□□ -1.89
CASQ1P31415 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.25□□□□□ -1.89
CASQ1P31415 AL592437.1-201ENST00000443781 492 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms