Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MIR199A2-201ENST00000385289 110 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 TAF9BP1-201ENST00000396646 746 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 RNA5SP146-201ENST00000410743 123 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 SNORA57.3-201ENST00000411095 141 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 OR51A3P-201ENST00000413596 924 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 ELOCP17-201ENST00000414751 326 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 RANP8-201ENST00000444720 713 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 COX6CP2-201ENST00000444980 225 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 NPM1P49-201ENST00000448027 714 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA11P31270 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA11P31270 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 AC079140.3-201ENST00000511111 550 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC007991.1-201ENST00000522680 631 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXA11P31270 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 AP000873.5-201ENST00000533906 236 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC008507.1-201ENST00000587506 734 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 AC006539.2-201ENST00000601729 572 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 AL390838.2-201ENST00000602394 274 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXA11P31270 MIR92B-201ENST00000607575 96 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 AC131235.4-201ENST00000609288 620 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 AC018755.4-201ENST00000619715 454 ntBASIC4.23□□□□□ -1.73
HOXA11P31270 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HOXA11P31270 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXA11P31270 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXA11P31270 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
HOXA11P31270 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 AC011978.2-201ENST00000569835 2054 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC008725.1-201ENST00000605123 2263 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HOXA11P31270 Y_RNA.311-201ENST00000365068 96 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 Y_RNA.408-201ENST00000383987 102 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AL121834.1-202ENST00000404494 277 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA11P31270 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXA11P31270 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC241584.1-201ENST00000438469 1241 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC093899.1-201ENST00000457984 376 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC091564.1-201ENST00000464563 479 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC087385.1-201ENST00000475062 312 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 RPL7P24-201ENST00000493052 752 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC004069.2-201ENST00000505438 1114 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA11P31270 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 RN7SKP277-201ENST00000516895 283 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 IGHV3-32-201ENST00000519182 355 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.22□□□□□ -1.73
HOXA11P31270 OR5M7P-201ENST00000526140 972 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.22□□□□□ -1.73
HOXA11P31270 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC006362.1-201ENST00000567392 174 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 BPTFP1-201ENST00000579209 492 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 MIR4801-201ENST00000582704 82 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC079089.3-201ENST00000603094 673 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC005332.10-201ENST00000612725 619 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC092794.1-201ENST00000612734 582 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AC008083.4-201ENST00000615076 444 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 MIR7844-201ENST00000616161 122 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 AL607023.1-201ENST00000620045 248 ntBASIC4.22□□□□□ -1.73
HOXA11P31270 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.22□□□□□ -1.73
HOXA11P31270 AC073348.1-201ENST00000623002 331 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms