Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.84□□□□□ -1.95
COL4A5P29400 AC026464.5-201ENST00000562497 722 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A5P29400 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.84□□□□□ -1.95
COL4A5P29400 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
COL4A5P29400 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.84□□□□□ -1.95
COL4A5P29400 AC117529.2-201ENST00000512159 2068 ntBASIC2.84□□□□□ -1.95
COL4A5P29400 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
COL4A5P29400 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A5P29400 AL021368.2-201ENST00000606125 5352 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A5P29400 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A5P29400 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
COL4A5P29400 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
COL4A5P29400 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
COL4A5P29400 RPL5P19-201ENST00000404228 893 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 NCSTNP1-201ENST00000406229 144 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 RPS27P29-201ENST00000463110 252 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 RN7SL297P-201ENST00000483161 293 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 LINC00888-204ENST00000487386 421 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 RN7SKP282-201ENST00000516824 299 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.83□□□□□ -1.96
COL4A5P29400 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.83□□□□□ -1.96
COL4A5P29400 AC022960.2-201ENST00000616300 666 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.83□□□□□ -1.96
COL4A5P29400 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.83□□□□□ -1.96
COL4A5P29400 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.83□□□□□ -1.96
COL4A5P29400 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.83□□□□□ -1.96
COL4A5P29400 XPOTP1-201ENST00000443317 2398 ntBASIC2.83□□□□□ -1.96
COL4A5P29400 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
COL4A5P29400 RAD1P1-201ENST00000231383 813 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A5P29400 RNU6-178P-201ENST00000384631 104 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AL162578.1-201ENST00000406202 378 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AC009302.1-201ENST00000417147 390 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A5P29400 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A5P29400 ST13P20-201ENST00000447996 1065 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.82□□□□□ -1.96
COL4A5P29400 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC114982.2-201ENST00000461396 358 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC116337.1-201ENST00000509680 687 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC016252.1-201ENST00000609721 474 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 VN1R9P-201ENST00000614184 867 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A5P29400 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A5P29400 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A5P29400 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A5P29400 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A5P29400 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.82□□□□□ -1.96
COL4A5P29400 AL356292.1-201ENST00000283110 373 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 SNORA80E-201ENST00000384744 137 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 RPS20P25-201ENST00000412447 352 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 VN1R31P-201ENST00000417498 730 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A5P29400 VN1R96P-201ENST00000446052 858 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AC126182.1-201ENST00000478134 357 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.82□□□□□ -1.96
COL4A5P29400 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC074029.1-201ENST00000552531 1044 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.82□□□□□ -1.96
COL4A5P29400 AC004825.2-201ENST00000616634 455 ntBASIC2.82□□□□□ -1.96
COL4A5P29400 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
COL4A5P29400 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.82□□□□□ -1.96
COL4A5P29400 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL4A5P29400 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
COL4A5P29400 AC026523.2-201ENST00000625039 7739 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 RNA5SP105-201ENST00000391123 113 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 AL591416.1-201ENST00000404015 867 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.81□□□□□ -1.96
COL4A5P29400 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.81□□□□□ -1.96
COL4A5P29400 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.81□□□□□ -1.96
COL4A5P29400 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.81□□□□□ -1.96
COL4A5P29400 AC147055.1-201ENST00000509261 750 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.81□□□□□ -1.96
COL4A5P29400 RN7SKP219-201ENST00000516825 296 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 PDCL2P2-201ENST00000533651 189 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
COL4A5P29400 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.81□□□□□ -1.96
COL4A5P29400 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.81□□□□□ -1.96
COL4A5P29400 AL008729.2-201ENST00000606393 473 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 MIR6873-201ENST00000622788 63 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 AC097714.1-201ENST00000511272 1647 ntBASIC2.81□□□□□ -1.96
COL4A5P29400 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
COL4A5P29400 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
COL4A5P29400 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL4A5P29400 AC107081.1-201ENST00000414975 361 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
COL4A5P29400 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.8□□□□□ -1.96
COL4A5P29400 MTCO3P11-201ENST00000455103 774 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.8□□□□□ -1.96
COL4A5P29400 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.8□□□□□ -1.96
COL4A5P29400 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.8□□□□□ -1.96
COL4A5P29400 MIR5007-201ENST00000583098 95 ntBASIC2.8□□□□□ -1.96
COL4A5P29400 MIR5092-201ENST00000583139 88 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms