Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.16□□□□□ -1.42
RFX1P22670 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RFX1P22670 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
RFX1P22670 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX1P22670 RN7SKP185-201ENST00000362813 326 ntBASIC6.16□□□□□ -1.42
RFX1P22670 RNU6-188P-201ENST00000364207 107 ntBASIC6.16□□□□□ -1.42
RFX1P22670 RNU6-43P-201ENST00000384302 107 ntBASIC6.16□□□□□ -1.42
RFX1P22670 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.16□□□□□ -1.42
RFX1P22670 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX1P22670 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX1P22670 AC092447.6-201ENST00000414578 210 ntBASIC6.16□□□□□ -1.42
RFX1P22670 MTCO2P27-201ENST00000420740 428 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL391219.1-201ENST00000422570 483 ntBASIC6.16□□□□□ -1.42
RFX1P22670 RPL7P46-201ENST00000425129 740 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL138785.1-201ENST00000425821 331 ntBASIC6.16□□□□□ -1.42
RFX1P22670 TMEM183AP1-205ENST00000432739 290 ntBASIC6.16□□□□□ -1.42
RFX1P22670 MRPS18BP2-201ENST00000434310 759 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL772161.1-201ENST00000439130 476 ntBASIC6.16□□□□□ -1.42
RFX1P22670 PRPS1P1-201ENST00000445305 876 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL162389.1-201ENST00000449233 177 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AC128716.1-201ENST00000475129 166 ntBASIC6.16□□□□□ -1.42
RFX1P22670 DUTP1-201ENST00000493631 470 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX1P22670 SNORA25.17-201ENST00000517184 124 ntBASIC6.16□□□□□ -1.42
RFX1P22670 TRMT10BP1-201ENST00000519377 943 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX1P22670 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC6.16□□□□□ -1.42
RFX1P22670 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.16□□□□□ -1.42
RFX1P22670 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX1P22670 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX1P22670 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RFX1P22670 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX1P22670 LLPHP1-201ENST00000603571 367 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AC092807.2-201ENST00000609367 243 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL357559.1-201ENST00000622228 274 ntBASIC6.16□□□□□ -1.42
RFX1P22670 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX1P22670 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
RFX1P22670 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 AL139811.1-201ENST00000424779 2299 ntBASIC6.16□□□□□ -1.42
RFX1P22670 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 AC109780.1-201ENST00000451768 1344 ntBASIC6.16□□□□□ -1.42
RFX1P22670 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RFX1P22670 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.16□□□□□ -1.42
RFX1P22670 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.16□□□□□ -1.42
RFX1P22670 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
RFX1P22670 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RFX1P22670 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.15□□□□□ -1.42
RFX1P22670 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RFX1P22670 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 SNORD42.2-201ENST00000365570 69 ntBASIC6.15□□□□□ -1.42
RFX1P22670 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.15□□□□□ -1.42
RFX1P22670 Y_RNA.576-201ENST00000384781 102 ntBASIC6.15□□□□□ -1.42
RFX1P22670 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RFX1P22670 GLULP6-201ENST00000399502 913 ntBASIC6.15□□□□□ -1.42
RFX1P22670 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.15□□□□□ -1.42
RFX1P22670 DPPA2P3-201ENST00000411853 655 ntBASIC6.15□□□□□ -1.42
RFX1P22670 BX323014.1-201ENST00000412876 237 ntBASIC6.15□□□□□ -1.42
RFX1P22670 RAC1P6-201ENST00000423911 575 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.15□□□□□ -1.42
RFX1P22670 CFL1P1-202ENST00000432948 411 ntBASIC6.15□□□□□ -1.42
RFX1P22670 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.15□□□□□ -1.42
RFX1P22670 RPL29P29-201ENST00000448725 423 ntBASIC6.15□□□□□ -1.42
RFX1P22670 snoU13.3-201ENST00000459441 104 ntBASIC6.15□□□□□ -1.42
RFX1P22670 RPL35AP28-201ENST00000459730 331 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC068587.1-201ENST00000483613 781 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC083904.1-201ENST00000487828 231 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.15□□□□□ -1.42
RFX1P22670 RNU6-559P-201ENST00000516151 98 ntBASIC6.15□□□□□ -1.42
RFX1P22670 RNU6-1038P-201ENST00000516516 104 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AP001804.3-201ENST00000525146 880 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC109635.4-202ENST00000531666 412 ntBASIC6.15□□□□□ -1.42
RFX1P22670 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.15□□□□□ -1.42
RFX1P22670 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.15□□□□□ -1.42
RFX1P22670 MIR3171-201ENST00000584270 74 ntBASIC6.15□□□□□ -1.42
RFX1P22670 BNIP3P25-201ENST00000596023 559 ntBASIC6.15□□□□□ -1.42
RFX1P22670 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.15□□□□□ -1.42
RFX1P22670 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.15□□□□□ -1.42
RFX1P22670 CTHRC1P1-201ENST00000605383 469 ntBASIC6.15□□□□□ -1.42
RFX1P22670 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX1P22670 MIR6748-201ENST00000610433 71 ntBASIC6.15□□□□□ -1.42
RFX1P22670 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.15□□□□□ -1.42
RFX1P22670 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RFX1P22670 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RFX1P22670 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
RFX1P22670 AC093535.2-201ENST00000624769 2326 ntBASIC6.15□□□□□ -1.43
RFX1P22670 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
RFX1P22670 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.15□□□□□ -1.43
RFX1P22670 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
RFX1P22670 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
RFX1P22670 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
RFX1P22670 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms