Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.32□□□□□ -1.56
ITGA4P13612 AC005868.1-201ENST00000536421 331 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 AC125611.2-201ENST00000551907 647 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 AC079075.1-201ENST00000559543 878 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 RN7SL802P-201ENST00000577858 299 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 AC015917.1-201ENST00000579654 510 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.32□□□□□ -1.56
ITGA4P13612 Z84480.1-201ENST00000605131 311 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 MIR6780A-201ENST00000615089 68 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 AC079597.1-201ENST00000624306 508 ntBASIC5.32□□□□□ -1.56
ITGA4P13612 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ITGA4P13612 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ITGA4P13612 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.32□□□□□ -1.56
ITGA4P13612 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ITGA4P13612 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.31□□□□□ -1.56
ITGA4P13612 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ITGA4P13612 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 SNORA73.1-201ENST00000363107 205 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNU6-1243P-201ENST00000364028 107 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 Y_RNA.234-201ENST00000364409 97 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNU6-359P-201ENST00000365466 108 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNU6-767P-201ENST00000384132 107 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNU6-1158P-201ENST00000391167 107 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 AL357515.1-201ENST00000402967 542 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.31□□□□□ -1.56
ITGA4P13612 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.31□□□□□ -1.56
ITGA4P13612 AC114755.2-201ENST00000413520 361 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC007390.1-201ENST00000415722 356 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AL807761.1-201ENST00000417622 171 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.31□□□□□ -1.56
ITGA4P13612 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.31□□□□□ -1.56
ITGA4P13612 NRBF2P3-201ENST00000432731 865 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC016691.1-201ENST00000441321 413 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 TPT1P13-201ENST00000449760 499 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RPL10P17-201ENST00000453852 316 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNU6-261P-201ENST00000459506 102 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 SNORA40.12-201ENST00000516329 111 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RNA5SP392-201ENST00000516905 112 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.31□□□□□ -1.56
ITGA4P13612 RPL23AP53-201ENST00000521854 457 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.31□□□□□ -1.56
ITGA4P13612 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 AP006289.1-201ENST00000538089 277 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ITGA4P13612 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 AC055876.1-202ENST00000567053 138 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 MIR4795-201ENST00000584182 89 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.31□□□□□ -1.56
ITGA4P13612 AC018638.8-201ENST00000588755 281 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 AL356585.4-201ENST00000623078 1229 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 AC138649.5-201ENST00000637456 137 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.31□□□□□ -1.56
ITGA4P13612 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 AC097461.1-201ENST00000568928 2821 ntBASIC5.31□□□□□ -1.56
ITGA4P13612 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.31□□□□□ -1.56
ITGA4P13612 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
ITGA4P13612 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
ITGA4P13612 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 ELL2P4-201ENST00000446870 1376 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 AC079741.1-201ENST00000321498 212 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RNU6-845P-201ENST00000362578 103 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RNY1P12-201ENST00000364251 105 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RNU6-108P-201ENST00000365558 107 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 RNU6-398P-201ENST00000384143 109 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 MIR298-201ENST00000401212 88 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RPS4XP9-201ENST00000405151 780 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RNU6-1068P-201ENST00000410958 103 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RPS20P15-201ENST00000412792 311 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC099336.2-201ENST00000422457 254 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC092832.1-201ENST00000422934 400 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 PSMA6P3-201ENST00000428242 164 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 RPL34P6-201ENST00000432390 345 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 GPR143P-201ENST00000434155 205 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC011753.3-201ENST00000443436 406 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms